Job Description P32138 Confidence 98.55% Date Thu Jan 5 11:49:24 GMT 2012 Rank 32 Aligned Residues 312 % Identity 14% Template c1ea9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cyclomaltodextrinase; PDBTitle: cyclomaltodextrinase Resolution 3.2 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.								.	.	.	.	.
Predicted Secondary structure																								.																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																								.																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	.	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	.	.	.	.	.	.	.	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	.	.	.	.	.	.	.	V	D	L	T	N
Query Conservation																								.																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																								.																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V	L	L	D	A	V	F	N	H	S	G	R	T	F	P	P	F	V	D	V	L	K	N	G	E	K	S	K	Y	K	D	W	F	H	I	R	S	L	P	L	E	V	V	D	G	I	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H
Template Known Secondary structure												T	T	T										S	B			T	T	S										T	T	T		G	G	G	G	G	B		B	S	S	S	S				S	S	S	S		S	B		B	S	S	S		T	T		B	B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D	T	Y	L	H	N	G	V	S	A	E	I	M	H	N	A	W	P	A	L	W	A	K	C	N	Y	E	A	L	E	E	T	G	K	L	G	E	I	L	F	F	M	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.					.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		P	D	V	K	E	Y	L	L	K	A	A	E	Y	W	I	R	E	T	G	I	D	G	W	R	L	D	V	A	N	E	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P	D	A	.	.	Y	I	L	G	E	V	W	H	E
Template Known Secondary structure																				T							T	T	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T		.	.								S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.																				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.
			455	.	.	.	.	460	.	.	.	.	.	.	.	.											.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.							.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence		.															.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		.	R	A	G	S	T	G	S	Q	K	Y	S	T	M	M	.	.	.	.	.	.	.	.	.	.	W	A	G	D	Q	N	V	D	W	S	L	D	D	G	L	A	S	V	V	P	A	A	L	.	.	.	.	.	.	S	L	A	M	T	G	H	G	L	H	H	S	D	I	G	G	Y	T	T	L	F	E	M	K	R	S
Query Conservation		.															.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.											.	.	.	.										.	.	.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		S	S	I	W	L	E	G	D	Q	F	D	A	V	M	N	Y	P	F	T	N	A	V	L	D	F	F	I	H	Q	I	A	D	A	E	K	.	.	.	.	F	S	F	M	L	G	K	Q	L	A	G	Y	P	R	Q	A	S	E	V	M	F	N	L	L	D	S	H	D	T	A	R	L	L	T	Q	A	D	G	D	K	R
Template Known Secondary structure			S	G	G	G	S	S	S	S		S	S					T	T									S	S			S		T	T		.	.	.	.												S												S	S		T	T	S							T	T	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.									.	.	.	540	.	.	.	.	.	.	.	.	.				550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																.						.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																.						.	.	.	.	.	.	.	.														.	.	.
Query Sequence		K	E	L	L	L	R	W	C	D	F	S	A	F	T	.	P	M	M	R	T	.	.	.	.	.	.	.	.	H	E	G	N	R	P	G	D	N	W	Q	F	D	.	.	.	G	D	A	E	T	I	A	H	F	A	R	M	T	T	V	F	T	T	L	K	P	Y	L	K	E	A	V	A	L	N	A	K	S	G	L	P
Query Conservation																.						.	.	.	.	.	.	.	.														.	.	.
Alig confidence																.						.	.	.	.	.	.	.	.														.	.	.																				.	.	.	.	.	.	.	.	.								.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.								.
Template Sequence		K	M	K	L	A	V	L	F	Q	F	T	Y	F	G	T	P	C	I	Y	Y	G	D	E	V	G	L	D	G	G	H	D	P	G	C	R	K	C	M	E	W	D	E	T	K	H	D	K	D	L	F	A	F	Y	Q	T	V	I	R	L	R	Q	A	H	.	.	.	.	.	.	.	.	.	A	A	L	R	T	G	T	.
Template Known Secondary structure													S	S	S						T	T	T	T	T			S			S	T	T	S	S								T	T	T																				.	.	.	.	.	.	.	.	.	T					S		.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.										.	.	500	.	.	.	.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.			.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		V	M	R	P	L	F	L	H	Y	E	D	D	A	H	T	Y	T	L	K	Y	Q	Y	L	L	G	R	D	I	L	V	A	P	V	H	E	E	G	R	S	D	W	T	L	Y	L	P	E	D	N	W	V	H	A	W	T	G	E	A	F	.	.	R	G	G	E	V	T	V	N	A	P	I	G	K	P	P	V	F	Y	R
Query Conservation																																																													.	.
Alig confidence		.																					.	.	.																																				.	.
Template Conservation		.																					.	.	.
Template Sequence		.	F	K	F	L	T	A	E	K	N	S	R	Q	I	A	Y	L	R	E	D	D	.	.	.	Q	D	T	I	L	V	V	M	N	N	D	K	A	G	H	T	L	T	L	P	V	R	H	A	Q	W	T	H	L	W	Q	D	D	V	L	T	A	A	H	G	Q	L	T	V	K	L	P	A	Y	G	F	A	V	L	K	A
Template Known Secondary structure		.								T	T											T	.	.	.	T											T	T										S	S	S						S	S	S								S	S	S							T	T
Template Predicted Secondary structure		.																					.	.	.
Template SS confidence
			505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		664	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		581	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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