Job Description P32138 Confidence 97.67% Date Thu Jan 5 11:49:24 GMT 2012 Rank 81 Aligned Residues 144 % Identity 15% Template c1cygA_ PDB info PDB header:glycosyltransferase Chain: A: PDB Molecule:cyclodextrin glucanotransferase; PDBTitle: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase) Resolution 2.50 Å

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		268	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.											.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure											.	.	.												.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence											.	.	.												.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		C	Q	K	K	L	D	T	M	R	.	.	.	N	A	G	V	K	V	N	G	I	W	A	.	.	.	.	.	.	.	.	.	.	Q	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	.	.	.	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L
Query Conservation											.	.	.												.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence											.	.	.												.	.	.	.	.	.	.	.	.	.																	.											.	.	.
Template Conservation																																																			.
Template Sequence		W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	D	M	G	V	T	A	I	W	I	S	Q	P	V	E	N	V	F	S	V	M	N	D	A	S	G	S	A	S	Y	H	G	Y	W	A	R	.	D	F	K	K	P	N	P	F	F	G	T	L	S	D	F	Q	R	L	V	D	A	A	H	A	K	G	I	K	V	I
Template Known Secondary structure											T	S	T	T	T	T	T	T																		S	S	S	S				S	T	T	S		S			.							T	T	T																T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		332	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.											.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.													.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	I	N	P	.	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	.	.	.	.	.	.	.	.	.	.	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	T	N	P	E	A	Y	A	W	F	K	E
Query Conservation							.																						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	F	A	P	N	H	T	S	P	A	S	E	T	N	P	S	Y	M	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	A	N	M	Y	F	H	H	N	G	G	T	T	F	S	S	L	E	D	G	I	Y	R	N	L	F	D	L	A	D	L	N	H	Q	N	P	V	I	D	R	Y	L	K	D
Template Known Secondary structure						T	T							S	S		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S						S	S	B	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	V	K	M	W	I	.	D	M	G	I	D	G	I	R	M	D	A	V	K	H	M	P	F	G
Template Known Secondary structure								.	T	T	T							S		G	G	G	S		S
Template Predicted Secondary structure								.
Template SS confidence
		210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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