Job Description P36548 Confidence 100.00% Date Thu Jan 5 11:53:13 GMT 2012 Rank 6 Aligned Residues 169 % Identity 23% Template c3qayC_ PDB info PDB header:lyase Chain: C: PDB Molecule:endolysin; PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																								.	.	.	.	.
Query SS confidence																					.	.																																								.	.	.	.	.
Query Sequence		K	R	V	V	V	L	D	P	G	H	G	G	I	D	T	G	A	I	G	.	.	R	N	G	S	K	E	K	H	V	V	L	A	I	A	K	N	V	R	S	I	L	R	N	H	G	I	D	A	R	L	T	R	S	G	D	T	F	I	P	.	.	.	.	.	L	Y	D	R	V	E	I	A	H	K	H	G	A	D	L
Query Conservation																					.	.																																								.	.	.	.	.
Alig confidence																					.	.																																								.	.	.	.	.
Template Conservation
Template Sequence		H	M	K	I	C	I	T	V	G	H	S	I	L	K	S	G	A	C	T	S	A	D	G	V	V	N	E	Y	Q	Y	N	K	S	L	A	P	V	L	A	D	T	F	R	K	E	G	H	K	V	D	V	I	I	C	P	E	K	Q	F	K	T	K	N	E	E	K	S	Y	K	I	P	R	V	N	S	G	G	Y	D	L
Template Known Secondary structure													B		T	T	S		B		S		B	S	S	S	B																			T	T										S	S			S	S	T												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	S	I	H	A	D	G	F	T	N	P	K	A	A	G	A	S	V	F	A	L	S	N	R	G	A	S	S	A	M	A	K	Y	L	S	E	R	E	N	R	A	D	E	V	A	G	K	K	A	T	D	K	D	H	L	L	Q	Q	V	L	F	D	L	V	Q	T	D	T	I	K	N	S	L	T	L	G	S	H	I
Query Conservation
Alig confidence													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	E	L	H	L	N	A	S	N	G	.	Q	G	K	G	S	E	V	L	Y	Y	S	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	Y	A	T	R	I
Template Known Secondary structure										S	S	S	.				S						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.																																																.	.	.	.	.	.	110	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	K	K	I	K	P	V	H	K	L	H	S	R	N	T	E	Q	.	A	A	F	V	V	L	K	S	P	S	V	P	S	V	L	V	E	T	S	F	I	T	N	P	E	E	E	R	L	L	G	T	A	A	F	R	Q	K	I	A	T	A	I	A	E	G	V	I	S	Y
Query Conservation																			.
Alig confidence								.	.										.																																					.
Template Conservation								.	.																																															.
Template Sequence		C	D	K	L	G	T	.	.	V	F	K	N	R	G	A	K	L	D	K	R	L	Y	I	L	N	S	S	K	P	T	A	V	L	I	E	S	F	F	C	D	N	K	E	D	Y	D	K	A	K	K	L	G	H	E	.	G	I	A	K	L	I	V	E	G	V	L	N	K
Template Known Secondary structure						T	T	.	.	T	S									T	T						S		S	S										T	T															.												T	S
Template Predicted Secondary structure								.	.																																															.
Template SS confidence
		112	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions