Job Description P36548 Confidence 86.82% Date Thu Jan 5 11:53:13 GMT 2012 Rank 7 Aligned Residues 177 % Identity 19% Template c2qvpC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution Resolution 2.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	K	S	G	G	K	R	V	V	V	L	D	P	G	.	H	G	G	I	D	T	G	A	I	G	R	N	G	S	K	E	K	H	V	V	L	A	I	A	K	N	V	R	S	I	L	R	N	H	G	I	D	A	R	L	.	.	.	.	.	.	.	.	.	.	.	T	R	S	G	D	T	F	I	P	L	Y	D	R
Query Conservation																	.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		P	G	Q	K	A	G	L	P	N	L	L	I	S	A	G	F	H	G	E	E	S	A	G	.	.	.	.	.	.	.	.	.	P	W	G	L	L	H	F	L	S	Q	L	D	G	E	L	F	K	R	V	N	L	S	V	L	P	L	V	N	P	T	G	F	A	K	G	H	R	F	N	E	L	G	E	N	P	N	R	G
Template Known Secondary structure		S	S			T	T	S									S	S	T	T		T			.	.	.	.	.	.	.	.	.										T			S	G	G	G	G	S									S								T		S	S		T	T	S			T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80										.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
																										118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	A	H	K	H	G	A	D	L	F	M	S	I	H	A	D	G	F	T	N	P	K	A	A	G	A	S	V	F	A	L	S	N	R	G	A	S	S	A	M	A	K	Y	L	S	E	R	E	N	R	A	D	E	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		F	F	I	E	N	G	K	A	K	P	G	A	D	T	S	A	E	G	R	I	L	L	E	H	A	H	L	L	Q	V	A	S	R	D	G	I	L	T	C	H	E	.	.	.	.	D	V	L	X	T	D	T	Y	V	Y	T	F	E	P	S	Q	A	P	G	R	F	S	H	S	L	R	D	A	L	G	Q	Y	F	P	I
Template Known Secondary structure						T	T						T	T											T								T	T	T								.	.	.	.		T	T		S	S	B							S	S	S	S														T	T	S		B
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	K	A	T	D	K	D	H	L	L	Q	Q	V	L	F	D	L	V	Q	T	D	T	I	K	N	S	L	T	L	G	S	H	I	L	K	K	I	K	P	V	H	K	L	H	S	R	N	T	E	Q	A	A	F	V	V	L	K	S	P	S	V	P	S	V	L	V	E	T	S	F	I	T	N	P	E	E	E	R
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		A	A	D	G	D	V	D	N	C	P	V	R	S	G	V	I	F	N	H	F	D	T	S	F	E	S	F	L	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	V	G	C	C	S	E	T	P	.	G	Q	Q	P	L	D	Q	R
Template Known Secondary structure				S				T	T				B	T	T				S				S	S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S									.	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																														.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	T	A	A	F	R	Q	K	I	A	T	A	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	A	N	A	A	A	X	N	T	F	V	N	X	L	A
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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