 |
Job Description | P36548 | Confidence | 43.12% | Date | Thu Jan 5 11:53:13 GMT 2012 |
Rank | 31 | Aligned Residues | 48 |
% Identity | 17% | Template | c2i4lC_ |
PDB info |
PDB header:ligase | Chain: C: PDB Molecule:proline-trna ligase; |
PDBTitle: rhodopseudomonas palustris prolyl-trna synthetase
|
Resolution | 2.00 Å |
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | V | L | A | I | A | K | N | V | R | S | I | L | R | N | H | G | I | D | A | R | L | T | R | S | G | D | T | F | I | P | L | Y | D | R | V | E | I | A | H | K | H | G | A | D | L | F | M | S | I |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   | . | . | . |
|   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
Template Sequence |   |
A | A | T | D | A | A | C | D | Q | L | Y | R | E | L | S | A | K | G | V | D | V | L | Y | . |
. |
. |
D | D | T | D | Q | R | A | G | A | K | F | A | T | A | D | L | I | G | I | P | W | Q | I | H | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | . | . | . |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | |
|
|
. | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|