Job Description P36548 Confidence 43.39% Date Thu Jan 5 11:53:13 GMT 2012 Rank 28 Aligned Residues 66 % Identity 26% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	V	V	V	L	D	P	G	H	G	G	I	D	T	G	A	I	G	R	N	G	S	K	E	K	H	V	V	L	A	I	A	K	N	V	R	S	I	L	R	N	H	G	I	D	A	R	L	T	R	S	G	D	T	F	I	P	L	Y	D	R	V	E	I	A	H	K	H	G	A	D	L	F	M	S	I	H	A
Query Conservation
Alig confidence									.	.	.							.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation									.	.	.							.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		T	D	K	I	A	V	L	.	.	.	L	G	G	T	S	A	.	.	.	.	.	.	.	.	.	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	.	.	.	.	.	.	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H
Template Known Secondary structure			S						.	.	.				S	S	T	.	.	.	.	.	.	.	.	.	T																		T	T								T	T	T	S		G	.	.	.	.	.	.	G	G	S	G	G	G	T
Template Predicted Secondary structure									.	.	.							.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.				.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		135	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	G	G
Template Known Secondary structure		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions