 |
Job Description | P0A7B3 | Confidence | 41.89% | Date | Thu Jan 5 11:05:16 GMT 2012 |
Rank | 305 | Aligned Residues | 60 |
% Identity | 15% | Template | d1nyra1 |
SCOP info | Anticodon-binding domain-like
| Class II aaRS ABD-related
| Anticodon-binding domain of Class II aaRS
|
Resolution | 2.80 |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | I | G | I | V | G | H | P | R | H | P | T | A | L | T | T | H | E | M | L | Y | R | W | L | C | T | K | G | Y | E | V | I | V | E | Q | Q | I | A | H | E | L | Q | L | K | N | V | K | T | G | T | L | A | E | I | G | Q | L | A | D | L | A | V | V | V | G | G | D |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
| . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   | . | . | . | . | . | . |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|   |   |
Template Sequence |   |
Q | V | Q | I | I | P | . |
V | N | V | D | L | H | Y | D | Y | A | R | Q | L | Q | D | E | L | K | S | Q | G | V | R | V | S | I | D | D | . |
. |
. |
. |
. |
. |
R | N | E | K | M | G | Y | K | I | R | E | A | Q | M | Q | K | I | P | Y | Q | I | V | V | G | D | K |
Template Known Secondary structure |   |
|  |  |  |  |  | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |
|
| . | . | . | . | . | . | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
547 | . | . | 550 | . | . | |
. | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|