Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7B3
Confidence42.93%DateThu Jan 5 11:05:16 GMT 2012
Rank297Aligned Residues89
% Identity17%Templatec3ot1B_
PDB info PDB header:structural genomicsChain: B: PDB Molecule:4-methyl-5(b-hydroxyethyl)-thiazole monophosphate PDBTitle: crystal structure of vc2308 protein
Resolution1.16 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50. ........60.........70..
Predicted Secondary structure 













......












.......
Query SS confidence 













































. . . . . .




















. . . . . . .
Query Sequence  KCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKN. . . . . . VKTGTLAEIGQLADLAVVVGG. . . . . . .
Query Conservation 
 
 

              
   
   
  
              ......             



 


.......
Alig confidence 
















..


























......




















.......
Template Conservation 


 


  

   
  ..   
 
  

  
   
      
 
  
  
  
           
 





       
Template Sequence  KRILVPVAHGSEEXETV. . IIVDTLVRAGFQVTXAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAF
Template Known Secondary structure 

TT

..TT
SSS
S
TTS

SGGG

GGG
S


Template Predicted Secondary structure 





..

























Template SS confidence 















































































   7..10.........20... ......30.........40.........50.........60.........70.........80....
 
   73......80.........90......
Predicted Secondary structure  ..







Query SS confidence  . .























Query Sequence  . . DGNMLGAARTLARYDIKVIGINRG
Query Conservation  ..


 
 
         





 
Alig confidence  ..























Template Conservation       
   
         
 


 
Template Sequence  ADSTALLALIDAFSQQGKLVAAIATP
Template Known Secondary structure  T
TT


Template Predicted Secondary structure 







Template SS confidence 

























   85....90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions