Job Description P0A7B3 Confidence 76.57% Date Thu Jan 5 11:05:16 GMT 2012 Rank 132 Aligned Residues 97 % Identity 21% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		5	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.		.	.	.	.
Predicted Secondary structure				.																																																																.	.	.	.						.
Query SS confidence				.																																																																.	.	.	.						.
Query Sequence		F	K	.	C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	.	.	.	.	V	G	G	D	G	.	N	M	L	G
Query Conservation				.																																																																.	.	.	.						.
Alig confidence				.						.	.	.	.	.																																.	.	.	.	.	.	.	.	.														.	.	.	.						.
Template Conservation										.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		M	R	Q	R	I	L	V	V	.	.	.	.	.	D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	.	.	.	.	.	.	.	.	.	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R
Template Known Secondary structure										.	.	.	.	.		S															T	T									G	G	G			.	.	.	.	.	.	.	.	.									S						S	S		S	S	S
Template Predicted Secondary structure										.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	A	R	T	L	A	R	Y	D	I	K	V	I	G	I	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	G	F	L	T	.	D	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation						.	.
Template Sequence		V	L	R	A	.	.	D	S	G	V	P	I	V	M	L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	K	P	F	K	P	K	E	L	V	A	R	V	R	A	R	L
Template Known Secondary structure						.	.												T	T		S	S								T	T								S
Template Predicted Secondary structure						.	.
Template SS confidence
		70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions