Job Description P0A7B3 Confidence 23.10% Date Thu Jan 5 11:05:16 GMT 2012 Rank 472 Aligned Residues 101 % Identity 16% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	.	.	.	.	V	G	G	D	G	N	M	L	G	A	A	R	T
Query Conservation																																																																	.	.	.	.
Alig confidence							.	.	.	.	.																								.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation							.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		N	A	I	I	I	.	.	.	.	.	D	D	H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	.	.	.	.	.	.	.	.	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R
Template Known Secondary structure							.	.	.	.	.																	T	T						.	.	.	.	.	.	.	.			S	S	S	T	T											S						T	T		S	S	S
Template Predicted Secondary structure							.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.						.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		L	A	R	Y	D	I	K	V	I	G	I	N	R	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	G	F	L	T	D	.	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E	G	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		K	R	Q	Y	S	G	I	I	I	I	V	S	A	K	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y
Template Known Secondary structure			T	T			S											S	T							T	T		S					G	G	G		T												T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions