Job Description P0A7B3 Confidence 51.91% Date Thu Jan 5 11:05:16 GMT 2012 Rank 233 Aligned Residues 100 % Identity 12% Template c3cfyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus Resolution 2.50 Å

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		5	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																																																	.	.	.	.
Query SS confidence				.																																																																	.	.	.	.
Query Sequence		F	K	.	C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	V	.	.	.	.	G	G	D	G	N	M	L	G	A
Query Conservation				.																																																																	.	.	.	.
Alig confidence				.						.	.	.	.	.																																.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation										.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		L	R	P	R	V	L	L	V	.	.	.	.	.	E	D	S	T	S	L	A	I	L	Y	K	Q	Y	V	K	D	E	P	Y	D	I	F	H	V	E	T	G	R	D	A	I	.	.	.	.	.	.	.	.	.	Q	F	I	E	R	S	K	P	Q	L	I	I	L	D	L	K	L	P	D	M	S	G	E	D	V	L	D
Template Known Secondary structure										.	.	.	.	.		S		T	T									T	T	T	S	S	S						S	S						.	.	.	.	.	.	.	.	.									S						S	B		S	S	S	B
Template Predicted Secondary structure										.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	R	T	L	A	R	Y	D	I	K	V	I	G	I	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	G	F	L	T	.	D	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		W	I	N	Q	N	D	I	P	T	S	V	I	I	A	T	A	H	G	S	V	D	L	A	V	N	L	I	Q	K	G	A	E	D	F	L	E	K	P	I	N	A	D	R	L	K	T	S	V	A	L	H	L	K
Template Known Secondary structure						T	T										S	S												T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions