Job Description P0A7B3 Confidence 48.02% Date Thu Jan 5 11:05:16 GMT 2012 Rank 261 Aligned Residues 106 % Identity 21% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		F	K	C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	.	.	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	V	G	G	D	G	N	M	L	G	A	A	R	T
Query Conservation																															.	.
Alig confidence									.	.	.	.	.																		.	.															.	.	.	.	.	.	.	.																		.
Template Conservation									.	.	.	.	.																																		.	.	.	.	.	.	.	.																		.
Template Sequence		L	T	V	V	L	I	V	.	.	.	.	.	D	D	H	H	L	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	.	.	.	.	.	.	.	.	A	F	L	E	A	D	N	T	V	D	L	I	L	L	D	V	A	.	I	D	G	L	V	R	L	K	R
Template Known Secondary structure									.	.	.	.	.		S																	T	T							S	S						.	.	.	.	.	.	.	.					T	T				S								.
Template Predicted Secondary structure									.	.	.	.	.																																		.	.	.	.	.	.	.	.																		.
Template SS confidence
		1	.	.	.	.	.	.						.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		L	A	R	Y	D	I	K	V	I	G	I	N	R	.	.	.	.	.	.	.	.	.	.	.	G	N	L	G	F	L	T	D	.	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E	G	H	Y	I	S	E	K
Query Conservation															.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence			.												.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation			.
Template Sequence		F	.	D	P	S	N	A	V	A	L	I	S	G	E	H	E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R
Template Known Secondary structure			.		T	T	S																		T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure			.
Template SS confidence
		73		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions