Job Description P0A7B3 Confidence 100.00% Date Thu Jan 5 11:05:16 GMT 2012 Rank 6 Aligned Residues 252 % Identity 23% Template c2i2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase 1; PDBTitle: crystal structure of lmnadk1 from listeria monocytogenes Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	V	G	G	D	G	N	M	L	G	A	A	R	T	L	A	R	Y
Query Conservation
Alig confidence											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	M	I	T	S	K	G	D	.	E	K	S	D	L	L	R	L	N	M	I	A	G	F	G	E	Y	D	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	D	V	E	P	E	I	V	I	S	I	G	G	D	G	T	F	L	S	A	F	H	Q	Y	E	E	R
Template Known Secondary structure										S	.															T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		S							S											T	T	T	S
Template Predicted Secondary structure											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
				87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.																																																						.
Query SS confidence		.	.																																																						.
Query Sequence		.	.	D	I	K	V	I	G	I	N	R	G	N	L	G	F	L	T	D	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E	G	H	Y	I	S	E	K	R	F	L	L	E	A	Q	V	C	Q	Q	D	C	Q	.	K	R	I	S	T	A	I	N	E	V	V	L	H	P	G	K	V	A	H	M	I	E	F	E
Query Conservation		.	.																																																						.
Alig confidence		.	.																																																						.																.	.
Template Conservation																																																																									.	.
Template Sequence		L	D	E	I	A	F	I	G	I	H	T	G	H	L	G	F	Y	A	D	W	R	P	A	E	A	D	K	L	V	K	L	L	A	K	G	E	Y	Q	K	V	S	Y	P	L	L	K	T	T	V	K	Y	G	I	G	K	K	E	A	T	Y	L	A	L	N	E	S	T	V	K	S	S	.	.	G	G	P	F	V	V	D
Template Known Secondary structure		G	G	G								S	S	S			S	S					G	G	G											T																	S	S	S									S	S							S	.	.	S	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		V	Y	I	D	E	I	F	A	F	S	Q	R	S	D	G	L	I	I	S	T	P	T	G	S	T	A	Y	S	L	S	A	G	G	P	I	L	T	P	S	L	D	A	I	T	L	V	P	M	F	P	.	.	.	.	.	H	T	L	S	A	R	P	L	V	I	N	S	S	S	T	I	R	L	R	F	S	H	R	R	N
Query Conservation																																																				.	.	.	.	.
Alig confidence																																																				.	.	.	.	.																									.
Template Conservation																																																																																	.
Template Sequence		V	V	I	N	D	I	H	F	E	R	F	R	G	D	G	L	C	M	S	T	P	S	G	T	T	A	Y	N	K	S	L	G	G	A	L	M	H	P	S	I	E	A	M	Q	L	T	E	M	A	S	I	N	N	R	V	Y	R	T	I	G	S	P	L	V	F	P	K	H	H	V	V	S	L	Q	P	V	N	D	K	.
Template Known Secondary structure					T	T									S							T	G	G	G	G	T					T	T						T	T	S									S				S	S	S	S					S						T	T								S	S			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	I	S	C	D	S	Q	I	A	L	P	I	Q	E	G	E	D	V	L	I	R	R	C	D	Y	H	L	N	L	I	H	P	K	D	Y	S	Y	F	N	T	L	S	T	K	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		D	F	Q	I	S	V	D	H	.	L	S	I	L	H	R	D	V	Q	E	I	R	Y	E	V	S	A	K	K	I	H	F	A	R	F	R	S	F	P	F	W	R	R	V	H	D	S	F
Template Known Secondary structure								T	T	.							S																			S
Template Predicted Secondary structure										.
Template SS confidence
		216	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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