 |
Job Description | P0A7B3 | Confidence | 95.37% | Date | Thu Jan 5 11:05:16 GMT 2012 |
Rank | 35 | Aligned Residues | 52 |
% Identity | 35% | Template | c2higA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:6-phospho-1-fructokinase; |
PDBTitle: crystal structure of phosphofructokinase apoenzyme from trypanosoma2 brucei.
|
Resolution | 2.40 Å |
|
 |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | D | L | A | V | V | V | G | G | D | G | N | M | L | G | A | A | R | T | L | A | R | . |
. |
. |
. |
. |
Y | D | I | K | V | I | G | I | N | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | L | G | F | L | T | D | L | D | P | D | N | A | Q | Q | Q | L | A | D | V |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|
|
|
|
| . | . |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
G | V | N | I | L | F | T | V | G | G | D | G | T | Q | R | G | A | L | V | I | S | Q | E | A | K | R | R | G | V | D | I | S | V | F | G | V | P | K | T | I | D | N | D | L | S | F | S | H | R | T | F | G | F | Q | T | A | . |
. |
V | E | K | A | V | Q | A | I | R | A | A |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |
|
| T | T | S | S |
|
|
| S | S |
|
| T | T |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
. | . | . | . | . | 250 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|