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Job Description | P0A7B3 | Confidence | 40.28% | Date | Thu Jan 5 11:05:16 GMT 2012 |
Rank | 321 | Aligned Residues | 74 |
% Identity | 11% | Template | c2funB_ |
PDB info |
PDB header:apoptosis/hydrolase | Chain: B: PDB Molecule:caspase-8; |
PDBTitle: alternative p35-caspase-8 complex
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Resolution | 3.00 Å |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | N | N | H | F | K | C | I | G | I | V | G | H | P | . |
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R | H | P | T | A | L | T | T | H | E | M | L | Y | R | W | L | C | T | K | G | Y | E | V | I | V | E | Q | Q | I | A | H | E | L | Q | L | K | N | V | K | T | G | T | L | A | E | I | G | Q | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | S | K | P | R | G | Y | C | L | I | I | N | N | H | N | F | A | K | A | R | E | K | V | P | K | L | H | S | I | R | D | R | N | G | T | H | L | D | A | G | A | L | T | T | T | F | E | E | L | H | F | E | I | K | P | H | H | D | C | T | V | E | Q | I | Y | E | I | L | K | I | Y | Q | L | M | D | H | S | N | M |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2228 | . | 2230 | . | . | . | . | . | . | . | . | . | 2240 | . | . | . | . | . | . | . | . | . | 2250 | . | . | . | . | . | . | . | . | . | 2260 | . | . | . | . | . | . | . | . | . | 2270 | . | . | . | . | . | . | . | . | . | 2280 | . | . | . | . | . | . | . | . | . | 2290 | . | . | . | . | . | . | . | . | . | 2300 | . | . | . | . | . | . | . |
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64 | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | D | L | A | V | V | V | G | G | D | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | C | F | I | C | C | I | L | S | H | G |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2308 | . | 2310 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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