Job Description P0A7B3 Confidence 100.00% Date Thu Jan 5 11:05:16 GMT 2012 Rank 5 Aligned Residues 256 % Identity 29% Template c1yt5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:inorganic polyphosphate/atp-nad kinase; PDBTitle: crystal structure of nad kinase from thermotoga maritima Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	V	V	G	G	D	G	N	M	L	G	A	A	R	T	L	A
Query Conservation
Alig confidence				.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	.	I	A	I	L	Y	R	E	E	R	E	K	E	G	E	F	.	.	.	L	K	E	K	I	S	K	E	H	E	V	I	E	F	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	A	P	G	R	V	T	A	D	L	I	V	V	V	G	G	D	G	T	V	L	K	A	A	K	K	A	A
Template Known Secondary structure				.							G	G	G							.	.	.						T	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S		S		B			S																T	T	B
Template Predicted Secondary structure				.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.															.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	D	I	K	V	I	G	I	N	R	G	N	L	G	F	L	T	D	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E	G	H	Y	I	S	E	K	R	F	L	L	E	A	Q	V	C	Q	Q	D	C	Q	K	R	I	S	T	A	I	N	E	V	V	L	H	P	G	K	V	A	H	M	I	E	F	E	V
Query Conservation
Alig confidence			.																																																		.	.	.	.	.
Template Conservation			.																																																		.	.	.	.	.
Template Sequence		D	.	G	T	P	M	V	G	F	K	A	G	R	L	G	F	L	T	S	Y	T	L	D	E	I	D	R	F	L	E	D	L	R	N	W	N	F	R	E	E	T	R	W	F	I	Q	I	E	S	E	L	.	.	.	.	.	G	N	H	L	A	L	N	D	V	T	L	E	R	D	L	S	G	K	M	V	E	I	E	V
Template Known Secondary structure		T	.	T								S	S	S			S	S			B		G	G	G										T	T															T	T	.	.	.	.	.						S	S								T	T	S
Template Predicted Secondary structure			.																																																		.	.	.	.	.
Template SS confidence
		63		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	D	E	I	F	A	F	S	Q	R	S	D	G	L	I	I	S	T	P	T	G	S	T	A	Y	S	L	S	A	G	G	P	I	L	T	P	S	L	D	A	I	T	L	V	P	M	F	P	H	T	L	S	A	R	P	L	V	I	N	S	S	S	T	I	R	L	R	F	S	H	R	R	N	D	L	E	I	S	C
Query Conservation
Alig confidence																																																																						.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		E	V	E	H	H	S	S	M	W	F	F	A	D	G	V	V	I	S	T	P	T	G	S	T	A	Y	S	L	S	I	G	G	P	I	I	F	P	E	C	E	V	L	E	I	S	P	I	A	P	Q	F	F	L	T	R	S	V	V	I	P	S	N	F	K	V	V	V	E	.	.	.	S	Q	R	D	I	N	M	L	V
Template Known Secondary structure				T	T	S								S							T	G	G	G	G	T	T	T	T	T	T	T						T	T										S		S	T	T									T	T	S						.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	I	A	L	P	I	Q	E	G	E	D	V	L	I	R	R	C	D	Y	H	L	N	L	I	H	P	K	D	Y	S	Y	F	N	T	L	S	T	K	L	G	W	S	K	K
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		D	G	V	.	.	.	L	T	G	K	T	K	R	I	E	V	K	K	S	R	R	Y	V	R	I	L	R	P	P	E	Y	D	Y	V	T	V	I	R	D	K	L	G	Y	G	R	R
Template Known Secondary structure		T	T		.	.	.																							T	T														S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		214	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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