Job Description P0A7B3 Confidence 36.75% Date Thu Jan 5 11:05:16 GMT 2012 Rank 345 Aligned Residues 74 % Identity 11% Template c1qduI_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:caspase-8 alpha-chain; PDBTitle: crystal structure of the complex of caspase-8 with the tripeptide2 ketone inhibitor zevd-dcbmk Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.																		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	N	H	F	K	C	I	G	I	V	G	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	S	K	P	R	G	Y	C	L	I	I	N	N	H	N	F	A	K	A	R	E	K	V	P	K	L	H	S	I	R	D	R	N	G	T	H	L	D	A	G	A	L	T	T	T	F	E	E	L	H	F	E	I	K	P	H	H	D	C	T	V	E	Q	I	Y	E	I	L	K	I	Y	Q	L	M	D	H	S	N	M
Template Known Secondary structure					S	S																		S		G	G	G	T	T					T	T														T	T	T								S																S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	A	V	V	V	G	G	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	C	F	I	C	C	I	L	S	H	G
Template Known Secondary structure		S								S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions