Job Description P0A7B3 Confidence 34.81% Date Thu Jan 5 11:05:16 GMT 2012 Rank 371 Aligned Residues 101 % Identity 12% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		H	F	K	C	I	G	I	V	G	H	P	R	H	P	T	A	L	T	T	H	E	M	L	Y	R	W	L	C	T	K	G	Y	E	V	I	V	E	Q	Q	I	A	H	E	L	Q	L	K	N	V	K	T	G	T	L	A	E	I	G	Q	L	A	D	L	A	V	.	.	.	.	V	V	G	G	D	G	N	M	L	G	A
Query Conservation																																																																			.	.	.	.
Alig confidence					.					.	.	.	.	.																																.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation					.					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		N	V	R	.	V	L	V	V	.	.	.	.	.	E	D	E	R	D	L	A	D	L	I	T	E	A	L	K	K	E	X	F	T	V	D	V	C	Y	D	G	E	E	G	X	.	.	.	.	.	.	.	.	.	Y	X	A	L	N	E	P	F	D	V	V	I	L	D	I	X	L	P	V	H	D	G	W	E	I	L	K
Template Known Secondary structure					.					.	.	.	.	.		S	S														T	T							S	S						.	.	.	.	.	.	.	.	.						S			S						S			S	S	S
Template Predicted Secondary structure					.					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.		.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	R	T	L	A	R	Y	D	I	K	V	I	G	I	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	G	F	L	T	.	D	L	D	P	D	N	A	Q	Q	Q	L	A	D	V	L	E	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		S	X	R	E	S	G	V	N	T	P	V	L	X	L	T	A	L	S	D	V	E	Y	R	V	K	G	L	N	X	G	A	D	D	Y	L	P	K	P	F	D	L	R	E	L	I	A	R	V	R	A	L	I	R	R
Template Known Secondary structure						T	T										S	S									T						S					S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions