Job Description P32720 Confidence 96.65% Date Thu Jan 5 11:50:43 GMT 2012 Rank 2 Aligned Residues 291 % Identity 10% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		K	P	F	N	F	A	L	F	W	D	K	Y	G	T	F	F	I	L	A	I	I	V	A	I	F	G	S	L	S	P	E	Y	F	L	T	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	T	Q	I	F	V	Q	S	S	V	T	V	L	I	G	M	G	E	F	F	A	I	L	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N	P
Template Known Secondary structure																														B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T																											T		T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.																																																													.	.	.
Query SS confidence		.																																																													.	.	.
Query Sequence		.	V	A	G	I	D	L	S	V	G	A	I	L	A	L	S	G	M	V	T	A	K	L	M	L	A	G	V	D	P	F	L	A	A	M	I	G	G	V	L	V	G	G	A	L	G	A	I	N	G	C	L	V	N	W	T	G	L	H	P	F	.	.	.	I	I	T	L	G	T	N	A	I	F	R	G	I	T	L	V
Query Conservation		.																																																													.	.	.
Alig confidence		.																							.	.																																					.	.	.
Template Conservation																									.	.
Template Sequence		L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	.	.	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W
Template Known Secondary structure		T			T	T	T	T	T															T	.	.	S		T	T																												T
Template Predicted Secondary structure																									.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	A	N	S	V	Y	G	F	S	F	D	F	V	N	F	F	A	A	S	V	I	G	I	P	V	P	V	I	F	S	L	I	V	A	L	I	L	W	F	L	T	T	R	M	R	L	G	R	N	I	Y	A	L	G	G	N	K	N	S	A	F	Y	S	G	I	D	V	K	F	H	I	L	V	V	F	I	I	S
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		A	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	.	.	.	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T
Template Known Secondary structure																			T				T	T			G	G	G																					.	.	.														T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.
Predicted Secondary structure														.	.																																																									.	.	.	.
Query SS confidence														.	.																																																									.	.	.	.
Query Sequence		G	V	C	A	G	L	A	G	V	V	S	T	.	.	A	R	L	G	A	A	E	P	L	A	G	M	G	F	E	T	Y	A	I	A	S	A	I	I	G	G	T	S	F	F	G	G	K	G	R	I	F	S	V	V	I	G	G	L	I	I	G	T	I	N	N	G	L	N	I	L	.	.	.	.	Q	V	Q	T	Y	Y
Query Conservation														.	.																																																									.	.	.	.
Alig confidence														.	.																								.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	P	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V
Template Known Secondary structure																	S	S	S	S									T	T			S						.	.	.	.	.	.	.	.	.	.	.	.																					S		S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	V	M	G	G	L	I	I	A	A	V	A	L	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions