Job Description P32720 Confidence 16.52% Date Thu Jan 5 11:50:43 GMT 2012 Rank 8 Aligned Residues 189 % Identity 13% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		K	S	E	A	S	E	K	K	P	F	N	F	A	L	F	W	D	K	Y	G	T	F	F	I	L	A	I	I	V	A	I	F	G	S	L	S	P	E	Y	F	L	T	T	N	N	I	T	Q	I	F	V	Q	S	S	V	T	V	L	I	G	M	G	E	F	F	A	I	L	.	.	.	.	.	V	A	G	I	D	L	S
Query Conservation																																																																						.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.
Template Conservation
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S																													T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.										.	.	.
Query SS confidence																																													.	.	.	.										.	.	.
Query Sequence		V	G	A	I	L	A	L	S	G	M	V	T	A	K	L	M	L	A	G	V	D	P	F	L	A	A	M	I	G	G	V	L	V	G	G	A	L	G	A	I	N	G	C	.	.	.	.	L	V	N	W	T	G	L	H	P	.	.	.	F	I	I	T	L	G	T	N	A	I	F	R	G	I	T	L	V	I	S	D	A
Query Conservation																																													.	.	.	.										.	.	.
Alig confidence																																													.	.	.	.										.	.	.																					.
Template Conservation																																																																																	.
Template Sequence		H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	.
Template Known Secondary structure						G	G	G						T	T	T	T	T	T	T		S																																				T	T						T																.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	Y	G	F	S	F	D	F	V	N	F	F	A	A	S	V	I	G	I	P	V	P	V	I	F	S	L	I	V	A	L	I	L	W	F	L	T	T	R	M	R	L	G	R
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q
Template Known Secondary structure		.	.	.	.																																				T	S	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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