Job Description P03007 Confidence 100.00% Date Thu Jan 5 10:57:50 GMT 2012 Rank 9 Aligned Residues 188 % Identity 17% Template d2qxfa1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.50

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
Predicted Secondary structure																																			.														.	.																														.
Query SS confidence																																			.														.	.																														.
Query Sequence		T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	.	V	N	R	R	L	T	G	N	N	F	H	V	Y	.	.	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	.	E
Query Conservation																																			.														.	.																														.
Alig confidence																			.	.	.	.	.												.														.	.																														.
Template Conservation																			.	.	.	.	.
Template Sequence		S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	.	.	.	.	.	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A
Template Known Secondary structure												S	S	S		T	T	T	.	.	.	.	.	S												T	T	S		B		S							B				T	T																							B
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.												.
Predicted Secondary structure												.	.									.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.									.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	D	E	F	M	D	Y	I	R	.	.	G	A	E	L	V	I	H	N	.	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	.	.	.	.	.	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	G	K	.	.	.	.	.	.	.	.	.	.	.	R
Query Conservation												.	.									.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.									.																										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	A	R	I	H	S	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S
Template Known Secondary structure											T	S	T	T						S	S	T	T	T	T												T	T	S		S	S	G	G	G	T	G	G	G																			T	T	S				B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	D	A	L	C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G	G	Q	T	S	M	A	F	A	M	E	G	E	T	Q	Q	Q	Q	G	E	A	T	I	Q
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		F	R	L	E	H	L	T	K	A	N	G	I	.	.	.	.	.	E	H	S	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L	F	D	Y	L	F	T	H	R	N	K	H	K	L	M	A	L	I	D
Template Known Secondary structure											T	T		.	.	.	.	.					T	T																	S										T	T	S							T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions