Job Description P03007 Confidence 100.00% Date Thu Jan 5 10:57:50 GMT 2012 Rank 6 Aligned Residues 175 % Identity 22% Template d2f96a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.09

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																	.	.																			.
Query SS confidence																																				.	.	.	.																	.	.																			.
Query Sequence		T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	.	.	.	.	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	.	.	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	.	L	D	K	P	T
Query Conservation																																				.	.	.	.																	.	.																			.
Alig confidence																	.	.	.	.	.															.	.	.	.																	.	.																			.
Template Conservation																	.	.	.	.	.
Template Sequence		Y	L	P	V	V	V	D	V	E	T	G	G	F	N	S	.	.	.	.	.	A	T	D	A	L	L	E	I	A	A	T	T	V	G	X	D	E	K	G	F	L	F	P	E	H	T	Y	F	F	R	I	E	P	F	E	G	A	N	I	E	P	A	A	L	E	F	T	G	I	K	L	D	H	P	L	R	X	A	V	Q
Template Known Secondary structure												S	S	S		T	.	.	.	.	.	T	T	B														T	T	S												B				T	T		B										T			T	T		T	T				B
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		F	A	E	V	A	D	E	F	M	D	Y	I	.	.	.	.	.	.	.	.	.	R	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	G	K	R	N	S	L	D	A	L	C
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																				.														.	.
Template Conservation																																																										.														.	.
Template Sequence		E	E	A	A	L	T	E	I	F	R	G	I	R	K	A	L	K	A	N	G	C	K	R	A	I	L	V	G	H	N	S	S	F	D	L	G	F	L	N	A	A	V	A	R	T	G	I	K	R	N	P	F	H	P	F	S	.	S	F	D	T	A	T	L	A	G	L	A	Y	G	.	.	Q	T	V	L	A	K	A	C
Template Known Secondary structure																				T	T		S							T	T																T											.													S	.	.			S
Template Predicted Secondary structure																																																										.														.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G	G	Q	T	S	M	A	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	A	G	X	E	F	D	N	R	E	A	H	S	A	R	Y	D	T	E	K	T	A	E	L	F	C	G	I	V	N	R	W	K	E	X	G	G	W
Template Known Secondary structure				T	T					T	T	S																									T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions