Job Description P03007 Confidence 99.72% Date Thu Jan 5 10:57:50 GMT 2012 Rank 20 Aligned Residues 172 % Identity 14% Template d2d5ra1 SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.50

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.											.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.											.
Query Sequence		R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	.	.	.	.	.	F	H	V	Y	L	K	P	D	R	L	.	V	D	P	E	A	F	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.											.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.											.
Template Conservation
Template Sequence		N	Y	V	A	M	D	T	E	F	P	G	V	V	A	R	P	I	G	E	F	R	S	N	A	D	Y	Q	Y	Q	L	L	R	C	N	V	D	L	L	K	I	I	Q	L	G	L	T	F	M	N	E	Q	G	E	Y	P	P	G	T	S	T	W	Q	F	N	F	K	F	N	L	T	E	D	M	Y	A	Q	D	S	I	E
Template Known Secondary structure																			S			S	S														T	T													T	T	S				S	S								B				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		65				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																											.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence			.	.	.																											.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		V	.	.	.	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	E	V	A	D	E	F	M	D	Y	I	R	.	.	.	.	.	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	.	.	.	.	.	.	.	I	P	K	T	N	T	F	C	K	V	T	D
Query Conservation			.	.	.																											.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence			.	.	.																											.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	T	T	S	G	I	Q	F	K	K	H	E	E	E	G	I	E	T	Q	Y	F	A	E	L	L	M	T	S	G	V	V	L	C	E	G	V	K	W	L	S	F	H	S	G	Y	D	F	G	Y	L	I	K	I	L	T	N	S	N	L	P	E	E	E	L	D	F	F	E	I	L	R	L	F	F	P	V	I	Y	D
Template Known Secondary structure							T											B											T	T	T	S	S	S	S	S	S						S	S														T	S				S	S													S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	V	A	R	K	M	F	P	G	K	R	N	S	L	D	A	L	C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G
Query Conservation
Alig confidence										.																						.
Template Conservation										.																						.
Template Sequence		V	K	Y	L	M	K	S	C	.	K	N	L	K	G	G	L	Q	E	V	A	E	Q	L	E	L	E	R	I	G	P	.	Q	H	Q	A	G	S	D	S	L	L	T	G	M	A	F	F	K	M	R	E
Template Known Secondary structure						G	G	G		.	T	T			S	S									T					S	S	.	T	T	S
Template Predicted Secondary structure										.																						.
Template SS confidence
		195	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions