Job Description P03007 Confidence 99.50% Date Thu Jan 5 10:57:50 GMT 2012 Rank 22 Aligned Residues 152 % Identity 18% Template d1x9ma1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	E	V	A	D	E	F	M
Query Conservation
Alig confidence																	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	V	S	D	I	E	A	N	A	L	L	E	S	V	.	.	.	.	.	T	K	F	H	C	G	V	I	Y	D	Y	S	T	A	.	.	.	.	.	E	Y	V	S	Y	R	P	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	A	Y	L	D	A	L	E
Template Known Secondary structure										S	S		G	G	G		.	.	.	.	.											T	T	T	T	.	.	.	.	.							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.
		88	.	90	.	.	.		.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure								.							.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.							.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	I	R	G	A	.	E	L	V	I	H	N	.	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	L	D	A	L	C	A	R	Y
Query Conservation								.							.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.							.																											.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		A	E	V	A	R	G	G	L	I	V	F	H	N	G	H	K	Y	D	V	P	A	L	T	K	L	A	K	L	Q	L	N	R	E	F	H	L	P	R	E	N	.	C	I	D	T	L	V	L	S	R	L	I	H	S	N	L	K	D	T	D	M	G	L	L	R	S	G	K	L	P	G	A	L	E	A	W	G	Y	R	L
Template Known Secondary structure						T	T						S	S	T	T	T	T																					G	G	G	.												T	T	T	S				T	T	T	T	S		G	G	G	S		S
Template Predicted Secondary structure																																										.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		153	.	.	.	.	.																												.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	D	N	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G	G	Q	T	S	M	A	F	A	M	E	G	E	T
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	M	K	G	E	Y	K	D	D	F	K	R	M	L	E	E	Q	G	E	E	Y	V	D	G	M	E	W	W	N	F	N	E	E	M	M	D	Y	N	V	Q	D	V	V	V	T	K	A	L	L	E	K	L	L	S	D	K	H	Y	F	P	P	E	I	D	F	T	D
Template Known Secondary structure																			T	T					T	T	G	G	G	T	S																									T		T	T	T	S		T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions