Job Description P03007 Confidence 95.68% Date Thu Jan 5 10:57:50 GMT 2012 Rank 56 Aligned Residues 127 % Identity 16% Template d1vk0a_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

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		6	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		T	R	Q	I	V	L	D	T	E	.	.	.	.	.	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.										.	.	.	.	.	.						.	.	.	.							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.						.	.	.	.							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	A	V	I	F	D	V	Y	W	D	V	G	F	T	K	T	S	G	W	S	L	S	.	.	.	.	.	.	S	V	K	L	S	.	.	.	.	T	R	N	L	C	L	.	.	.	F	L	R	L	P	K	P	F	H	D	N	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T														G	G	G	G					.	.	.	.	.	.						.	.	.	.		S	S				.	.	.						S	S			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.						.	.	.	.							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.					.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure													.	.																																																	.	.	.														.	.	.
Query SS confidence													.	.																																																	.	.	.														.	.	.
Query Sequence		E	V	A	D	E	F	M	D	Y	I	R	.	.	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	.	.	.	G	K	R	N	S	L	D	A	L	C	A	R	Y	.	.	.
Query Conservation													.	.																																																	.	.	.														.	.	.
Alig confidence		.	.	.	.	.							.	.																		.	.	.										.	.	.	.	.	.														.	.	.														.	.	.
Template Conservation		.	.	.	.	.																										.	.	.										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	L	Y	R	F	F	A	S	K	F	V	T	F	V	G	V	Q	I	E	E	D	L	D	L	L	R	.	.	.	E	N	H	G	L	V	I	R	N	.	.	.	.	.	.	A	I	N	V	G	K	L	A	A	E	A	R	G	T	L	V	L	E	F	L	G	T	R	E	L	A	H	R	V	L	W	S
Template Known Secondary structure		.	.	.	.	.						T		S	S	S					S	S										.	.	.								S	S	.	.	.	.	.	.													T		G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.																										.	.	.										.	.	.	.	.	.
Template SS confidence
							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
														153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	G	Q	L	D	S	I	E	A	K	W	E	K	A	G	P	E	E	Q	L	E	A	A	A	I	E	G	W	L	I	V	N	V	W	D	Q	L
Template Known Secondary structure												T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions