Job Description P03007 Confidence 99.77% Date Thu Jan 5 10:57:50 GMT 2012 Rank 19 Aligned Residues 168 % Identity 14% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.												.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.												.									.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.												.									.	.	.
Query Sequence		R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	.	.	.	.	.	.	.	.	.	.	.	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	.	.	.	.	.	.	N	F	H	V	Y	L	K	P	D	R	L	.	V	D	P	E	A	F	G	V	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.												.									.	.	.
Alig confidence																.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.												.									.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		N	H	V	S	I	S	T	E	F	V	G	S	K	V	.	.	.	.	.	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	E	I	M	S	T	E	S	L	E	L	L	R	K
Template Known Secondary structure																.	.	.	.	.												T	T													T	T					S	S	S		S						B				T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	E	V	A	D	E	F	M	D	Y	I	R	.	.	.	.	.	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	.	.	.	.	.	.	.	C	K	V	T	D	S	L	A	V
Query Conservation																												.	.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	I	N	F	E	K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W	V	H	Q	Y	M	P	N	F	Y	D	L	N	L	V
Template Known Secondary structure		T	T											B											T	S	S		S	S		T	T	S					S	S	T	T											T	T	S				S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		134	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	R	K	M	F	P	.	G	K	R	N	S	L	D	A	L	C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G
Query Conservation								.
Alig confidence								.																					.
Template Conservation																													.
Template Sequence		Y	K	I	I	Q	E	F	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	L	P	R	F	S	I	.	F	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K
Template Known Secondary structure						T	T	T					S								T	T					G	G	.	G	G	S
Template Predicted Secondary structure																													.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions