Job Description P03007 Confidence 98.62% Date Thu Jan 5 10:57:50 GMT 2012 Rank 41 Aligned Residues 169 % Identity 13% Template d1s5ja1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		M	S	T	A	I	T	R	Q	I	V	L	D	T	E	T	.	.	.	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		T	E	I	P	K	I	K	R	V	A	I	D	I	E	V	Y	T	P	V	K	G	R	I	P	D	S	Q	K	A	E	F	P	I	I	S	I	A	L	A	G	S	D	G	L	K	K	V	L	V	L	N	R	N	D	V	N	E	G	S	V	.	.	.	.	.	.	.	.	.	K	L	D	G	I	S	V	E	R	F	N
Template Known Secondary structure		S																	S	S	S	S					T	T	T			S										T	T	S									S	S								.	.	.	.	.	.	.	.	.			T	T							S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																				.	.	130	.	.	.	.	.	.
Predicted Secondary structure																	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	A	E	V	A	D	E	F	M	D	Y	I	R	G	.	A	E	L	V	I	H	N	A	A	.	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	L	A	V	A	R	K
Query Conservation																	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	Y	E	L	L	G	R	F	F	D	I	L	L	E	Y	P	I	V	L	T	F	N	G	D	D	F	D	L	P	Y	I	Y	F	R	A	L	K	L	G	Y	F	P	E	E	I	P	I	D	V	A	G	K	D	E	A	K	Y	L	A	G	L	H	I	D	L	Y	K	F	F	F	N	K	A	V	R	N	Y	A	F
Template Known Secondary structure		S													T	T		S					S	S	T	T	T	T											T	T	T			G	G	G		S					S	T	T					T	T	S										T	S							T	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.			.	.	.	.
Predicted Secondary structure																		.												.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																		.												.	.	.	.	.	.	.	.	.												.	.
Query Sequence		M	F	P	G	K	R	N	S	L	D	A	L	C	A	R	Y	.	E	I	D	N	S	K	R	T	L	H	G	.	.	.	.	.	.	.	.	.	A	L	L	D	A	Q	I	L	A	E	V	.	.	Y	L	A	M
Query Conservation																		.												.	.	.	.	.	.	.	.	.												.	.
Alig confidence																		.												.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		E	G	K	Y	N	E	Y	N	L	D	A	V	A	K	A	L	L	G	T	S	K	V	D	T	L	I	S	F	L	D	V	E	K	L	I	E	Y	N	F	R	D	A	E	I	T	L	Q	L	T	T	F	N	N	D
Template Known Secondary structure		T	T			S	S		S															S	S		T	T	T																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions