Job Description P03007 Confidence 98.66% Date Thu Jan 5 10:57:50 GMT 2012 Rank 39 Aligned Residues 155 % Identity 15% Template d1q8ia1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.00

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	I	T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.								.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.								.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	P	P	L	K	W	V	S	I	D	I	E	T	T	R	H	G	E	.	.	.	.	.	.	.	.	.	L	Y	C	I	G	L	E	.	.	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	.	.	.	.	.	.	.	.	.	.	.	L	E	Y	V	A	S	R	P	Q
Template Known Secondary structure																	T	T	S		.	.	.	.	.	.	.	.	.								.	.		T	T								S	S			S			T	T		S	S		.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.								.	.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.												.	.	.	.	.	200	.	.	.
		82	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																						.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure											.	.	.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	D	E	F	M	D	Y	I	.	.	.	R	G	A	E	L	V	I	H	N	A	A	.	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	D	S	L	A	V	A	R	K
Query Conservation											.	.	.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R	M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S
Template Known Secondary structure																S					S	S	T	T	T	T												T	T						S	S	S	S										S	S	S							B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		137		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																.							.	.	.	.	.	.	.
Query SS confidence			.																.							.	.	.	.	.	.	.
Query Sequence		M	.	F	P	G	K	R	N	S	L	D	A	L	C	A	R	Y	.	E	I	D	N	S	K	.	.	.	.	.	.	.	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M
Query Conservation			.																.							.	.	.	.	.	.	.
Alig confidence			.																.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T
Template Known Secondary structure		S					S										T	T			T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions