Job Description P03007 Confidence 98.54% Date Thu Jan 5 10:57:50 GMT 2012 Rank 42 Aligned Residues 170 % Identity 15% Template d1noya_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.20

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																											.	.																														.	.	.	.	.	.	.	.
Query SS confidence																																											.	.																														.	.	.	.	.	.	.	.
Query Sequence		R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	.	.	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	.	.	.	.	.	.	.	.
Query Conservation																																											.	.																														.	.	.	.	.	.	.	.
Alig confidence																																											.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	N	C	D	I	E	V	T	G	D	K	F	P	D	P	M	K	A	E	Y	E	I	D	A	I	T	H	Y	D	S	I	D	D	R	F	Y	V	F	D	L	L	N	S	M	Y	G	S	V	S	K	W	D	A	K	L	A	A	K	L	D	C	E	G	G	D	E	V	P	Q	E	I	L	D	R	V	I	Y	M
Template Known Secondary structure													S	S				T	T	T			S										T	T	T	T											S	S													S		G	G	G	T										T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
				77	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.																									.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.															.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.															.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	T	F	A	E	V	A	D	E	F	M	D	Y	I	.	.	.	R	G	A	E	L	V	I	H	N	A	A	.	F	D	I	G	F	M	D	Y	E	F	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	D	I	P	K	T	N	T	F	C	K
Query Conservation		.	.															.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	D	N	E	R	D	M	L	M	E	Y	I	N	L	W	E	Q	K	R	P	A	I	F	T	G	W	N	I	E	G	F	D	V	P	Y	I	M	N	R	V	K	M	I	L	G	E	R	S	M	K	R	F	S	P	I	G	R	V	K	S	K	L	L	Q	N	M	Y	G	S	K	E	I	Y	S	I	D	G	V	S
Template Known Secondary structure				S																S			S					S	S	T	T	T	T																			G	G	G	S	T	T	S									G	G	G		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	D	S	L	A	V	A	R	.	.	K	M	F	P	G	K	R	N	S	L	D	A	L	C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M
Query Conservation											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																									.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		I	L	D	Y	L	D	L	Y	K	K	F	A	F	T	N	L	P	S	F	S	L	E	S	V	A	Q	H	E	T	K	K	G	K	L	P	.	.	Y	D	G	P	I	N	K	L	R	E	T	N	H	Q	R	Y	I	S	Y	N	I	I	D	V	E	S	V	Q	A	I	D	K	I	R
Template Known Secondary structure													T					S			S										S						.	.		S	S		G	G	G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions