Job Description P03007 Confidence 100.00% Date Thu Jan 5 10:57:50 GMT 2012 Rank 14 Aligned Residues 167 % Identity 17% Template d1j9aa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																									.																	.	.	.	.	.	.	.
Query SS confidence																																									.																	.	.	.	.	.	.	.
Query Sequence		M	S	T	A	I	T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	.	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	.	.	.	.	.	.	.	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F
Query Conservation																																									.																	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.															.																	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		X	S	F	D	K	Q	N	L	I	W	I	D	L	E	X	T	G	L	D	P	.	.	.	.	.	E	K	E	R	I	I	E	I	A	T	I	V	T	D	K	N	L	N	I	L	A	E	G	P	V	L	A	V	H	Q	S	D	E	L	L	N	K	X	N	D	W	C	Q	K	T	H	S	E	N	G	L	I	E	R	I
Template Known Secondary structure		T	T			T	T										S	S	S		T	.	.	.	.	.	T	T													T	T	S									B		B									S	S												T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		L	L	D	K	P	T	F	A	E	V	A	D	E	F	M	D	Y	I	.	.	.	.	.	.	R	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	G	K	R	N	S	L	D
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																															.	.	.	.	.																		.	.	.	.
Template Conservation																																																								.	.	.	.	.																		.	.	.	.
Template Sequence		K	A	S	K	L	T	E	R	A	A	E	L	Q	T	L	D	F	L	K	K	W	V	P	K	G	A	S	P	I	C	G	N	S	I	A	Q	D	K	R	F	L	V	K	Y	X	P	D	L	A	D	Y	F	H	Y	.	.	.	.	.	R	H	L	D	V	S	T	L	K	E	L	A	A	R	W	K	P	.	.	.	.
Template Known Secondary structure		T	T			B														T	T	T	S		T	T	T	S					S	S																		S	S		S	.	.	.	.	.																	G	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.																		.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G	G	Q	T	S	M
Query Conservation
Alig confidence		.	.												.	.
Template Conservation		.	.												.	.
Template Sequence		.	.	E	I	L	E	G	F	K	K	E	N	T	.	.	H	L	A	L	D	D	I	R	E	S	I	K	E	L	A	Y	Y	R	E	H	F	X	K	L
Template Known Secondary structure		.	.	G	G	G	G	G							.	.	S																				T
Template Predicted Secondary structure		.	.												.	.
Template SS confidence
				150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions