Job Description P03007 Confidence 99.47% Date Thu Jan 5 10:57:50 GMT 2012 Rank 24 Aligned Residues 140 % Identity 19% Template c2kzzA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: klenow fragment with normal substrate and zinc only Resolution 2.25 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T	F	A	E	V	A	D	E
Query Conservation
Alig confidence																			.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	.	.	.	.	.	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	I	S	R	E	R	A	L	E	L
Template Known Secondary structure		S	S	S								S		S		T	T	T	.	.	.	.	.												T	T											S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																				.	.	.	.	.	.	400	.	.	.	.
		86	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.	.																																														.															.	.	.	.	.	.	.	.
Query SS confidence												.	.																																														.															.	.	.	.	.	.	.	.
Query Sequence		F	M	D	Y	I	R	G	A	E	L	.	.	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	P	G	.	K	R	N	S	L	D	A	L	C	A	R	Y	E	I	.	.	.	.	.	.	.	.
Query Conservation												.	.																																														.															.	.	.	.	.	.	.	.
Alig confidence												.	.													.	.	.	.										.	.	.	.	.																.															.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.										.	.	.	.	.
Template Sequence		L	K	P	L	L	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	.	.	.	.	A	N	Y	G	I	E	L	R	G	.	.	.	.	.	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E
Template Known Secondary structure							T		T	T	S					S	S									.	.	.	.		T	T	T						.	.	.	.	.														T	T	S	S			S									S
Template Predicted Secondary structure																										.	.	.	.										.	.	.	.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.					.	430	.	.	.	.	.	.	.						.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
															155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M
Template Known Secondary structure					S	S	T	T				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions