Job Description P03007 Confidence 95.44% Date Thu Jan 5 10:57:50 GMT 2012 Rank 57 Aligned Residues 67 % Identity 24% Template c2ex3I_ PDB info PDB header:transferase/replication Chain: I: PDB Molecule:dna polymerase; PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																														.	.	.	.	.	.	130	.
Predicted Secondary structure										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	E	F	M	D	Y	I	.	.	R	G	A	E	L	V	I	H	N	A	A	F	D	I	G	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	C	K	V	T	D	S	L
Query Conservation										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	E	F	M	A	W	V	L	K	V	Q	A	D	L	Y	F	H	N	L	K	F	A	G	A	F	I	I	N	W	L	E	R	N	G	F	K	W	S	A	D	G	L	P	N	T	Y	N	T	I	I	S	R	M	G	Q	W	Y	M	I	D	I	C	L	G	Y	K	G	K	R	K	I	H	T	V	I	Y	D	S	L
Template Known Secondary structure														S					S	S															T	T					S	S			T	T								T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	R	K	M	F	P	G	K	R	N	S	L	D	A	L	C	A	R	Y	E	I	D	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		K	K	.	.	.	.	.	.	.	L	P	F	P	V	K	K	I	A	K	D	F	K	L	T	V
Template Known Secondary structure				.	.	.	.	.	.	.	S		S									T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		124	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions