Job Description P03007 Confidence 100.00% Date Thu Jan 5 10:57:50 GMT 2012 Rank 2 Aligned Residues 211 % Identity 17% Template c1zbhA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																		.	.
Query SS confidence																																								.																		.	.
Query Sequence		S	T	A	I	T	R	Q	I	V	L	D	T	E	T	T	G	M	N	Q	I	G	A	H	Y	E	G	H	K	I	I	E	I	G	A	V	E	V	V	.	N	R	R	L	T	G	N	N	F	H	V	Y	L	K	P	D	R	.	.	L	V	D	P	E	A	F	G	V	H	G	I	A	D	E	F	L	L	D	K	P	T
Query Conservation																																								.																		.	.
Alig confidence																							.																	.																		.	.
Template Conservation																							.
Template Sequence		D	S	Y	Y	D	Y	I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	.	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	A	D	T
Template Known Secondary structure				S		S													T	T			.	T	T															T	T	T											B			S	S	S		S																		T	S	B
Template Predicted Secondary structure																							.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.											.																																		.	.
Query SS confidence																			.	.	.	.	.	.	.											.																																		.	.
Query Sequence		F	A	E	V	A	D	E	F	M	D	Y	I	R	G	A	E	L	.	.	.	.	.	.	.	V	I	H	N	A	A	F	D	I	G	.	F	M	D	Y	E	F	S	L	L	K	R	D	I	P	K	T	N	T	F	C	K	V	T	D	S	L	A	V	A	R	K	M	F	.	.	P	G	K	R	N	S	L	D	A	L
Query Conservation																			.	.	.	.	.	.	.											.																																		.	.
Alig confidence																			.	.	.	.	.	.	.											.															.	.																		.	.
Template Conservation																																																			.	.
Template Sequence		F	P	Q	V	L	K	K	V	I	D	L	M	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	S	W	D	M	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	.	.	P	F	A	K	K	W	I	N	I	R	K	S	Y	G	N	F	Y	K	V	P	R	S	Q	T	K	L	T	I	M
Template Known Secondary structure																T	T	B	T	T	T	B							S	S	S					T									T	T	B				.	.	G	G	G	S														T			G	G	G		S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	R	Y	E	I	D	N	S	K	R	T	L	H	G	A	L	L	D	A	Q	I	L	A	E	V	Y	L	A	M	T	G	G	Q	T	S	M	A	F	A	M	E	G	E	T	Q	Q	Q	Q	G	E	A	T	I	Q	R	I	V	R	Q	A	S	K	L	R	V	V	F
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		L	E	K	L	G	M	D	Y	D	G	R	.	P	N	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	M	L	Q	D	G	C	E	L	R	I	N	E	K	M	H	A	G	Q	L	M	S	V	S	S	S	L	P	I	E	G	T	P	P	P	Q	M	P	H	F
Template Known Secondary structure					T	T					S		.	T	T																			T	T											T	T							S	S	S													B
Template Predicted Secondary structure													.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions