Job Description P32684 Confidence 98.60% Date Thu Jan 5 11:50:08 GMT 2012 Rank 25 Aligned Residues 136 % Identity 21% Template d2ey4a2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 2.11

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																													.	.	.																											.	.																					.	.
Query SS confidence																													.	.	.																											.	.																					.	.
Query Sequence		L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	N	.	.	.	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	.	.	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	.	.
Query Conservation																													.	.	.																											.	.																					.	.
Alig confidence														.	.	.	.	.	.	.									.	.	.																											.	.							.	.	.	.											.	.
Template Conservation														.	.	.	.	.	.	.																																														.	.	.	.
Template Sequence		V	I	N	L	D	K	P	P	G	P	T	S	.	.	.	.	.	.	.	H	E	V	V	A	W	I	K	K	I	L	N	L	E	K	A	G	H	G	G	T	L	D	P	K	V	S	G	V	L	P	V	A	L	E	K	A	T	R	V	V	Q	A	L	L	.	.	.	.	P	A	G	K	E	Y	V	A	L	M	H	L
Template Known Secondary structure									S	S	S			.	.	.	.	.	.	.											T	T		S					S	S				T	T										G	G	G	G	G	G					T	.	.	.	.	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																														.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.															.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																													.	.	.	.	.	.
Query Sequence		D	K	P	I	T	E	E	F	I	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	.	.	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	.	.	.	.	.	.	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	D	V	P	E	D	K	I	I	Q	V	M	K	E	F	E	G	E	I	I	Q	R	P	P	L	R	S	A	V	K	R	R	L	R	T	R	K	V	Y	Y	I	E	V	L	E	I	E	G	R	D	V	L	F	R	V	G	V	E	A	G	T	Y	I	R	S	L	I	H	H	I	G	L	A	L	G	V	G	A	H
Template Known Secondary structure		S	S													T	T	S									S	S	S		S																			T	T										T	T														T	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	L	E	R	T	R	I	M	N	V	S	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	E	L	R	R	T	R	S	G	P	F	K	E	D	E
Template Known Secondary structure											T	T			S	S	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions