Job Description P32684 Confidence 98.63% Date Thu Jan 5 11:50:08 GMT 2012 Rank 24 Aligned Residues 136 % Identity 22% Template d2apoa2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 1.95

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.
Predicted Secondary structure																													.	.	.																																														.	.
Query SS confidence																													.	.	.																																														.	.
Query Sequence		L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	N	.	.	.	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	.	.	V	D	K
Query Conservation																													.	.	.																																														.	.
Alig confidence														.	.	.	.	.	.	.									.	.	.																										.	.																			.	.
Template Conservation														.	.	.	.	.	.	.																																					.	.
Template Sequence		V	V	V	V	D	K	P	R	G	P	T	S	.	.	.	.	.	.	.	H	E	V	S	T	W	V	K	K	I	L	N	L	D	K	A	G	H	G	G	T	L	D	P	K	V	T	G	V	L	P	V	A	L	E	R	.	.	A	T	K	T	I	P	M	W	H	I	P	P	K	E	Y	V	C	L	M	H	L	H	R
Template Known Secondary structure									S	S	S			.	.	.	.	.	.	.											T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	T	T	S	S											S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																					.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure														.	.	.																.	.	.	.																														.	.	.	.	.	.
Query SS confidence														.	.	.																.	.	.	.																														.	.	.	.	.	.
Query Sequence		P	I	T	E	E	F	I	R	G	M	S	A	.	.	.	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	.	.	.	.	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E	.	.	.	.	.	.	V	K	K	L	E	R	T	R	I	M	N
Query Conservation														.	.	.																.	.	.	.																														.	.	.	.	.	.
Alig confidence														.	.	.																.	.	.	.																	.	.												.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		D	A	S	E	E	D	I	L	R	V	F	K	E	F	T	G	R	I	Y	Q	R	R	I	R	K	I	H	E	L	E	L	L	D	K	D	G	K	D	V	L	F	R	V	K	C	Q	S	G	T	Y	.	.	I	R	K	L	C	E	D	I	G	E	A	L	G	T	S	A	H	M	Q	E	L	R	R	T	K	S	G	C
Template Known Secondary structure																S																					T	T										T	T			.	.												T	T	S													T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		211	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E	K	D
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions