Job Description P32684 Confidence 99.95% Date Thu Jan 5 11:50:08 GMT 2012 Rank 9 Aligned Residues 142 % Identity 19% Template d1v9ka_ SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 2.00

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.
Predicted Secondary structure																																					.	.	.	.																																	.	.
Query SS confidence																																					.	.	.	.																																	.	.
Query Sequence		E	P	R	E	A	E	D	L	V	L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	.	.	.	.	N	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	.	.	L	R	A	G	N	D	H
Query Conservation																																					.	.	.	.																																	.	.
Alig confidence																																					.	.	.	.																																	.	.
Template Conservation
Template Sequence		D	V	I	X	Y	E	D	D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	X
Template Known Secondary structure									S	S								T	T	S		S	S			S	S	S												S	T	T		S					S	S				T	T									S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		E	K	E	Y	L	V	T	V	D	K	P	I	T	E	E	F	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	K	E	A	P	.	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		Q	K	D	Y	L	A	L	V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G
Template Known Secondary structure											S				T	T														T	T	S								T	T	S	B													S	S									S	S			T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		198	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	I	A
Template Known Secondary structure				B	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions