Job Description P32684 Confidence 98.19% Date Thu Jan 5 11:50:08 GMT 2012 Rank 32 Aligned Residues 138 % Identity 19% Template c3uaiA_ PDB info PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae Resolution 3.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.
Predicted Secondary structure																													.	.	.																																															.	.	.
Query SS confidence																													.	.	.																																															.	.	.
Query Sequence		L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	N	.	.	.	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	.	.	.	D
Query Conservation																													.	.	.																																															.	.	.
Alig confidence														.	.	.	.	.	.	.									.	.	.																								.	.																						.	.	.
Template Conservation														.	.	.	.	.	.	.																																			.	.
Template Sequence		V	I	N	L	D	K	P	S	N	P	S	S	.	.	.	.	.	.	.	H	E	V	V	A	W	I	K	R	I	L	R	C	E	K	T	G	H	S	G	T	L	D	P	K	V	T	G	C	L	I	V	C	I	.	.	D	R	A	T	R	L	V	K	S	Q	Q	G	A	G	K	E	Y	V	C	I	V	R	L	H	D
Template Known Secondary structure									S	S	S			.	.	.	.	.	.	.														S					S			S	S	S	S										.	.	G	G	G	G	G	G						S	S											S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																			.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		143	.	.	.	.	.	.	150	.	.															.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		K	P	I	T	E	E	F	I	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	.	.	.	.	.	.	E	V	K	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	D	E	K	D	L	G	R	S	L	E	N	L	T	G	A	L	F	Q	R	P	P	L	K	R	Q	L	R	V	R	T	I	Y	E	S	N	L	I	E	F	D	N	K	R	N	L	G	V	F	W	A	S	C	E	A	G	T	Y	M	R	T	L	C	V	H	L	G	M	L	L	G	V	G	G	H	M	Q	E
Template Known Secondary structure				S	S	T										T																													T	T	T	T										T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		203	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	T	R	I	M	N	V	S	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R	V	R	S	G	A	L	S	E	N	D
Template Known Secondary structure								T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions