Job Description P32684 Confidence 100.00% Date Thu Jan 5 11:50:08 GMT 2012 Rank 1 Aligned Residues 239 % Identity 100% Template c3dh3C_ PDB info PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	S	V	R	L	N	K	Y	I	S	E	S	G	I	C	S	R	R	E	A	D	R	Y	I	E	Q	G	N	V	F	L	N	G	K	R	A	T	I	G	D	Q	V	K	P	G	D	V	V	K	V	N	G	Q	L	I	E	P	R	E	A	E	D	L	V	L	I	A	L	N	K	P	V	G	I	V	S	T	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	S	V	R	L	N	K	Y	I	S	E	S	G	I	C	S	R	R	E	A	D	R	Y	I	E	Q	G	N	V	F	L	N	G	K	R	A	T	I	G	D	Q	V	K	P	G	D	V	V	K	V	N	G	Q	L	I	E	P	R	E	A	E	D	L	V	L	I	A	L	N	K	P	V	G	I	V	S	T	T	E
Template Known Secondary structure													T	T	T	S	S											T	T					T	T					T	T					T	T						T	T								G	G	G										T	T		B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	R	D	N	I	V	D	F	V	N	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	D	K	P	I	T	E	E	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	E	R	D	N	I	V	D	F	V	N	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	D	K	P	I	T	E	E	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V
Template Known Secondary structure		S	S		T	T	B						T		S	S					S	S				T	T									S		T									G	G	G											S	S												T			B		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E	V	K	K	L	E	R	T	R	I	M	N	V	S	L	S	G	I	P	L	G	E	W	R	D	L	T	D	D	E	L	I	D	L	F	K	L	I	E	N	S	S	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E	V	K	K	L	E	R	T	R	I	M	N	V	S	L	S	G	I	P	L	G	E	W	R	D	L	T	D	D	E	L	I	D	L	F	K	L	I	E	N	S	S	S	E
Template Known Secondary structure											S	S	S							S				T	T									T	T												T	T				T	T			T	T																T					S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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