 |
| Job Description | P32684 | | Confidence | 21.27% | Date | Thu Jan 5 11:50:08 GMT 2012 |
| Rank | 90 | Aligned Residues | 29 |
| % Identity | 28% | Template | c2ca9B_ |
| PDB info |
PDB header:transcriptional regulation | Chain: B: PDB Molecule:putative nickel-responsive regulator; |
PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation
|
| Resolution | 2.05 Å |
|
| | |
2 | . | . | . | |
. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 |
| Predicted Secondary structure | |
|
|
|
| . |
|
|
|  | | | | | | |
|
|
|
|
| | | | | . | | | | | |
|
| Query SS confidence | |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Query Sequence | |
L | P | D | S | . |
S | V | R | L | N | K | Y | I | S | E | S | G | I | C | S | R | R | E | A | . |
D | R | Y | I | E | Q |
| Query Conservation | |
| | | | . | | |
|
| |
| |
|
| | |
| | |
|
|
| |
| . |
| |
|
| | |
| Alig confidence | |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Template Conservation | |
|
| | |
|
| | |
|
| | |
| | | |
|
| |
|
|
|
| |
|
|
|
|
|
| |
| Template Sequence | |
L | Q | Q | N | L | L | D | E | L | D | N | R | I | I | K | N | G | Y | S | S | R | S | E | L | V | R | D | M | I | R | E |
| Template Known Secondary structure | |
|
| | | | | | | | | T | T | T | G | G | G | T |
| S | S | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
| | | | | | | | | | | | | |
|
|
|
|
| | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
