Job Description P32684 Confidence 98.24% Date Thu Jan 5 11:50:08 GMT 2012 Rank 31 Aligned Residues 138 % Identity 22% Template c1sgvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub) Resolution 1.90 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																													.	.	.																																																.	.	.
Query SS confidence																													.	.	.																																																.	.	.
Query Sequence		L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	N	.	.	.	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	D	.	.	.
Query Conservation																													.	.	.																																																.	.	.
Alig confidence														.	.	.	.	.	.	.									.	.	.																										.	.																					.	.	.
Template Conservation														.	.	.	.	.	.	.																																					.	.
Template Sequence		I	V	V	I	D	K	P	A	G	M	T	S	.	.	.	.	.	.	.	H	D	V	V	G	R	C	R	R	I	F	A	T	R	R	V	G	H	A	G	T	L	D	P	M	A	T	G	V	L	V	I	G	I	E	R	.	.	A	T	K	I	L	G	L	L	T	A	A	P	K	S	Y	A	A	T	I	R	L	G	Q
Template Known Secondary structure									T	T				.	.	.	.	.	.	.											T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	T	T	T	S											T
Template Predicted Secondary structure														.	.	.	.	.	.	.																																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
																			143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	I	T	E	E	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	.	.	.	.	.	.	.	.	.	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	S	T	E	D	A	E	G	Q	V	L	Q	S	V	P	A	K	H	L	T	I	E	A	I	D	A	A	M	E	R	L	R	G	E	I	L	E	A	R	P	I	R	I	D	R	F	E	L	L	A	A	R	R	R	D	Q	L	I	D	I	D	V	E	I	D	C	S	S	G	T	Y	I	R	A	L	A	R	D	L
Template Known Secondary structure				T	T	S	B	T	T	S									T	T													T																								T	T											S			T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		197	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		G	Y	E	.	.	.	.	.	.	V	K	K	L	E	R	T	R	I	M	N	V	S	L	S	G
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	A	L	G	V	G	G	H	V	T	A	L	R	R	T	R	V	G	R	F	E	L	D	Q
Template Known Secondary structure						T	S													T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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