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Job DescriptionP77649
Confidence17.67%DateThu Jan 5 12:31:20 GMT 2012
Rank49Aligned Residues139
% Identity15%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  DGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLAD
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Template Sequence  DENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGTT




TTTT


SGGGTTTT
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   373......380.........390.........400.........410.........420........
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  FAIRHYWSHLADDEDKYRLWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKD. LYIIDFGLG. . . . . . . . . . . . . . .
Template Known Secondary structure  .....................TT
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GGGSSS.


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   429430.........440.........450.........460.. .......470.
 
   279280.........290.........300..... ....310.........320.
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Query Sequence  GRYSFDNQPAVALWNLQRLAQTLSPFV. . . AVDALNEALDSYQQVL
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Template Sequence  . . . KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY
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   472.......480.........490.........500.........510....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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