Job Description P77649 Confidence 58.52% Date Thu Jan 5 12:31:20 GMT 2012 Rank 5 Aligned Residues 207 % Identity 9% Template c3akjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ctka; PDBTitle: crystal structure of a helicobacter pylori proinflammatory kinase ctka Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	T	M	D	W	H	L	K	G	A	G	L	T	P	Y	S	R	M	G	D	G	R	A	V	L	R	S	T	I	R	E	S	L	A	S	E	A	M	H	Y	L	G	I	P	T	T	R	A	L	S	I	V	T	S	D	S	P	V	Y	R	E	T	A	E	P	G	A	M	L	M	R	V	A	P	S	H	L	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Sequence		N	N	E	L	Y	M	V	K	F	P	P	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	F	S	E	Y	V	A	C	H	I	V	N	S	L	G	L	K	V	Q	E	T	L	L	G	T	Y	K	N	K	I	V	.	.	.	.	.	.	.	.	V	A	C	K	D	F	T	T	H	Q	Y	E
Template Known Secondary structure		T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T			B									T	T				.	.	.	.	.	.	.	.						S	T	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.									.	.	.	.	.	80	.	.	.	.	.	.
		178	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		F	G	H	F	E	H	F	.	.	.	.	.	.	.	Y	Y	R	R	E	S	E	K	V	R	Q	L	A	D	F	A	I	R	H	Y	W	S	H	L	A	D	D	E	D	K	Y	R	L	W	F	S	D	V	V	A	R	T	A	S	L	I	A	Q	W	Q	T	V	G	F	A	H	G	V	M	N	T	D	N	M	S	L
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		L	V	D	F	L	S	L	K	N	T	M	I	E	L	E	K	S	G	K	D	T	N	L	N	D	V	L	Y	A	I	D	N	Q	H	F	I	E	P	K	V	L	K	C	F	F	W	D	M	F	V	A	.	.	.	.	.	D	T	L	L	G	N	F	D	R	H	N	G	N	W	G	F	L	R	A	S	N	S	K	E
Template Known Secondary structure										T	T		T	T		S	S		T	T			B												S	S	S																.	.	.	.	.					T		S				T	T	S	S						T	T	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		251	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.														.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		L	G	L	T	.	.	L	D	Y	G	P	F	G	F	L	D	D	Y	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	I	C	N	H	S	D	H	Q	G	R	Y	S	F	D	N	Q	P	A	V	A	L	W	.	.	.	.	.	.	.	N	L	Q	R	L	A	Q	T	L	S	P	F	V	A	V	D
Query Conservation						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	I	A	P	I	F	D	C	G	S	C	L	Y	P	Q	A	D	D	V	V	C	Q	K	V	L	S	N	I	D	E	L	N	A	R	I	Y	N	F	P	Q	S	I	L	K	D	D	N	D	K	K	I	N	Y	Y	D	F	L	T	Q	T	N	N	K	D	C	L	D	A	L	L	R	I	Y	P	R	I	D	M	N
Template Known Secondary structure							B				T	T	S	S		T	T											S											T	S	S			S		B		T	T	S		B								T	T														G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		309	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		A	L	N	E	A	L	D	S	.	.	.	Y	Q	Q	V	L	L	T	H	Y	G	E	R	M	R	Q	K
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		K	I	H	S	I	I	D	N	T	P	F	M	S	E	I	H	K	E	F	L	H	T	M	L	D	E	R
Template Known Secondary structure									T		T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions