Return to main results Retrieve Phyre Job Id

Job DescriptionP69451
Confidence14.67%DateThu Jan 5 12:11:41 GMT 2012
Rank86Aligned Residues36
% Identity17%Templated2vqca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain F112-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.
Predicted Secondary structure 














Query SS confidence 



































Query Sequence  EINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTF
Query Conservation          

   
   
   

  

      


Alig confidence 



































Template Conservation   

   

 
   

  

 
  


   
 




Template Sequence  EISVPSAYNIQRALKAICERHPDECEVQYKNRKTTF
Template Known Secondary structure 



TTT
SS
Template Predicted Secondary structure 











Template SS confidence 



































   34.....40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions