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Job DescriptionP69451
Confidence100.00%DateThu Jan 5 12:11:41 GMT 2012
Rank1Aligned Residues543
% Identity21%Templated1pg4a_
SCOP infoAcetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.. .......30.........40... ......50.........60........
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Query Sequence  WLNRYPADVPTEINPDRY. . . . . . . . . . QSLVDMFEQSVARYADQPAFV. . . . . . NMGEVMTFRKLEERSRAFAAYLQQG
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Template Conservation                              
     
   
   

  


           


 

   
  

  
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Template Sequence  WITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLD.
Template Known Secondary structure 
SB

S



TT

STT

TGGGTTS
SSTT
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   48.50.........60.........70.........80.........90.........100.........110.........120......
 
   6970.........80.........90.........100.........110.........120.........130.........140........
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Query Sequence  LGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVI
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Template Sequence  LGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDA.
Template Known Secondary structure  T

TT


SST


TTS
T
SSTTS.
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   127..130.........140.........150.........160.........170.........180.........190.........200.....
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  LTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTH
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Template Sequence  . . . . . . . LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTT
Template Known Secondary structure  .......TSTT

S


SS






BTTTTS
S





TTS

SSSS
S
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   206...210.........220.........230.........240.........250.........260.........270........
 
   229230.........240.........250.........260.........270.........280... ......290.........300.....
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Query Sequence  RNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLIT. . . NPRDIPGLVKELAKYPFTAITG
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Template Sequence  GGYLVYAATTFKYVFD. . YHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYT
Template Known Secondary structure  TT..

TT

S
TTSTTTT

S
TTSSSTTT
S
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   279280.........290.... .....300.........310.........320.........330.........340.........350......
 
   306...310......... 320.........330.........340......... 350.........360.........370.... .....
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Query Sequence  VNTLFNALLNNKEF. . QQLDFSSLHLSAGGGMPVQQVVAERWVKLT. . . GQYLLEGYGLTECAPLVSVNPYDID. YHSGS
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Template Conservation   
     
            
   
     
                     
   

 

                   
Template Sequence  APTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGS
Template Known Secondary structure 
TTGGGGTTT


TT

SS


TTTT
S
B

GGGSS
SB


TTT

B
TT
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   357..360.........370.........380.........390.........400.........410.........420.........430......
 
   380.........390.........400.........410. ........420......... 430.........440.........450....
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Query Sequence  IGLPVPSTEAKLVDDDDNEVPPGQPGELCVKG. . PQVMLGYWQRPDATDEII. . . KNGWLHTGDIAVMDEEGFLRIVDRK
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Template Sequence  ATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRV
Template Known Secondary structure 
BSB
TT


TT

B

SS
S

TT


TT
SSSTTS
TTS
S
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   437..440.........450.........460.........470.........480.........490.........500.........510......
 
   455....460.........470.........480.........490.........500.........510 .........520.........530
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Query Sequence  KDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTE. . . . ESLVTFCRRQLTGYKVPKLV
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Template Sequence  DDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVL
Template Known Secondary structure  SSTTSTTTTT
TT



T
GGG

S
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   517..520.........530.........540.........550.........560.........570.........580.........590......
 
   531........540.........550........
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Query Sequence  EFRDELPKSNVGKILRRELRDEARGKVD
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Template Sequence  HWTDSLPKTRSGKIMRRILRKIAAGDAD
Template Known Secondary structure 
S


B
TTS
B
T


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   597..600.........610.........620....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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