Job Description P69451 Confidence 100.00% Date Thu Jan 5 12:11:41 GMT 2012 Rank 17 Aligned Residues 500 % Identity 22% Template c3kxwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila Resolution 1.85 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		R	Y	Q	S	L	V	D	M	F	E	Q	S	V	A	R	Y	A	D	Q	P	A	F	V	N	M	G	.	.	.	.	E	V	M	T	F	R	K	L	E	E	R	S	R	A	F	A	A	Y	L	Q	Q	G	L	G	L	K	K	G	D	R	V	A	L	M	M	P	N	L	L	Q	Y	P	V	A	L	F	G	I	L	R
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.																						.
Template Conservation																																																					.
Template Sequence		Q	C	Q	S	L	V	D	V	V	R	L	R	A	L	H	S	P	N	K	K	S	C	T	F	L	N	K	E	L	E	E	T	X	T	Y	E	Q	L	D	Q	H	A	K	A	I	A	A	T	L	Q	A	.	E	G	A	K	P	G	D	R	V	L	L	L	F	A	P	G	L	P	L	I	Q	A	F	L	G	C	L	Y
Template Known Secondary structure		T		S	S													T	T	S								T	T																								.	T	T			T	T									S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		A	G	M	I	V	V	N	V	N	P	L	Y	T	P	.	.	.	R	E	L	E	H	Q	L	N	D	S	G	A	S	A	I	V	I	V	S	N	F	A	H	T	L	E	K	V	V	D	K	T	A	V	Q	H	V	I	L	T	R	M	G	D	Q	L	S	T	A	K	G	T	V	V	N	F	V	V	K	Y	I	K	R
Query Conservation																.	.	.
Alig confidence																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	C	I	A	V	P	I	Y	P	P	A	Q	E	K	L	L	D	K	A	Q	R	I	V	T	N	S	K	P	V	I	V	L	X	I	A	D	H	I	K	K	F	T	A	N	P	K	F	L	K	I	P	A	I	A	L	E	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T											S																	S																			T	T						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	K	Y	H	L	P	D	A	I	S	F	R	S	A	L	H	N	G	Y	R	M	Q	Y	V	K	P	E	L	V	P	E	D	L	A	F	L	Q	Y	T	G	G	T	T	G	V	A	K	G	A	M	L	T	H	R	N	M	L	A	N	L	E	Q	V	N	A	T	Y	G	P	L	L	H	P	G	K	E	L	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	N	R	S	S	S	W	Q	P	T	S	I	K	S	N	D	I	A	F	L	Q	Y	T	S	G	S	T	X	H	P	K	G	V	X	V	S	H	H	N	L	L	D	N	L	N	K	I	F	T	S	F	H	X	N	D	E	T	I	I	F	S	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G								T	T	S								S	S		S	S	S																						T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		V	T	A	L	P	L	Y	H	I	F	A	L	T	I	N	C	L	L	F	I	E	L	G	G	Q	N	L	L	I	T	N	P	R	D	I	P	G	L	V	K	E	L	A	K	Y	P	F	T	A	I	T	G	V	N	T	L	F	N	A	L	L	N	.	.	.	N	K	E	F	Q	Q	L	D	F	S	S	L	H	L	S
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.
Template Conservation
Template Sequence		L	P	P	H	H	D	X	G	L	I	G	C	I	L	T	P	I	Y	G	G	I	Q	A	I	X	X	S	P	F	S	F	L	Q	N	P	L	S	W	L	K	H	I	T	K	Y	K	A	T	I	S	G	S	P	N	F	A	Y	D	Y	C	V	K	R	I	R	E	E	K	K	E	G	L	D	L	S	S	W	V	T	A
Template Known Secondary structure		S		T	T	S						T	T	T							T															T											T		S						T												G	G	G	G	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.																									.	.	.	.	.	.	.	.	380
Predicted Secondary structure																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	G	G	M	P	V	Q	Q	V	V	A	E	R	W	V	K	L	T	.	.	.	.	.	.	G	Q	Y	L	L	E	G	Y	G	L	T	E	C	A	P	L	V	S	V	N	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	D	Y	H	S	G	S	I
Query Conservation																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	G	A	E	P	V	R	E	E	T	X	E	H	F	Y	Q	A	F	K	E	F	G	F	R	K	E	A	F	Y	P	C	Y	G	L	A	E	A	T	L	L	V	T	G	G	T	P	G	S	S	Y	K	T	L	T	L	A	K	E	Q	F	Q	D	H	R	V	H	F	A	D	D	N	S	P	G	S	Y	K	L	V
Template Known Secondary structure					S	S															G	G	G	T			G	G	G								G	G	G	S	S							T	T	S									S				S	S	S	B			B			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.						430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																	.																																			.	.	.	.	.
Query SS confidence																	.																																			.	.	.	.	.
Query Sequence		G	L	P	V	P	S	T	E	A	K	L	V	D	D	D	.	D	N	E	V	P	P	G	Q	P	G	E	L	C	V	K	G	P	Q	V	M	L	G	Y	W	Q	R	P	D	A	T	D	E	I	I	.	.	.	.	.	K	N	G	W	L	H	T	G	D	I	A	V	M	D	E	E	G	F	L	R	I	V	D	R	K
Query Conservation																	.																																			.	.	.	.	.
Alig confidence																	.																																			.	.	.	.	.
Template Conservation
Template Sequence		S	S	G	N	P	I	Q	E	V	K	I	I	D	P	D	T	L	I	P	C	D	F	D	Q	V	G	E	I	W	V	Q	S	N	S	V	A	K	G	Y	W	N	Q	P	E	E	T	R	H	A	F	A	G	K	I	K	D	D	A	I	Y	L	R	T	G	D	L	G	F	L	H	E	N	E	L	Y	V	T	G	R	I
Template Known Secondary structure							S	S							T	T	T			B			T	T	B								S	T	T	S				B	T	T											B			T	T				B											T	T								S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.				480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510							.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																											.	.	.																																.	.	.	.	.	.
Query SS confidence																											.	.	.																																.	.	.	.	.	.
Query Sequence		K	D	M	I	L	V	S	G	F	N	V	Y	P	N	E	I	E	D	V	V	M	Q	H	P	G	.	.	.	V	Q	E	V	A	A	V	G	V	P	S	G	S	S	G	E	A	V	K	I	F	V	V	K	K	D	P	S	L	T	E	.	.	.	.	.	.	E	S	L	V	T	F	C	R	R	Q	L	T	G	Y	K
Query Conservation																											.	.	.																																.	.	.	.	.	.
Alig confidence																											.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	L	I	I	I	Y	G	K	N	H	Y	P	Q	D	I	E	F	S	L	X	H	S	P	L	H	H	V	L	G	K	C	A	A	F	V	I	Q	E	E	H	E	Y	K	L	T	V	X	C	E	V	K	N	R	F	X	D	D	V	A	Q	D	N	L	F	N	E	I	F	E	L	V	Y	E	N	H	Q	L	E	V
Template Known Secondary structure		S									T	T												S	G	G	G	G	G												T	T											S		T	T																						S
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	K	L	V	E	F	R	D	E	L	P	K	S	N	V	G	K	I	L	R	R	E	L	R	D	E	A	R	G	K	V	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	I	V	L	I	P	L	K	A	X	P	H	T	T	S	G	K	I	R	R	N	F	C	R	K	H	L	L	D	K	T	L	P
Template Known Secondary structure									T	T		S				S																T		S
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.