Job Description P69451 Confidence 100.00% Date Thu Jan 5 12:11:41 GMT 2012 Rank 4 Aligned Residues 503 % Identity 23% Template c2vsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:surfactin synthetase subunit 3; PDBTitle: structure of surfactin a synthetase c (srfa-c), a2 nonribosomal peptide synthetase termination module Resolution 2.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	P	T	E	I	N	P	D	R	Y	Q	S	L	V	D	M	F	E	Q	S	V	A	R	Y	A	D	Q	P	A	F	V	N	M	G	E	V	M	T	F	R	K	L	E	E	R	S	R	A	F	A	A	Y	L	Q	Q	G	L	G	L	K	K	G	D	R	V	A	L	M	M	P	N	L	L	Q	Y	P	V	A
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		T	G	L	N	P	P	A	Q	A	H	E	T	K	P	L	T	Y	W	F	K	E	A	V	N	A	N	P	D	A	P	A	L	T	Y	S	G	Q	T	L	S	Y	R	E	L	D	E	E	A	N	R	I	A	R	R	L	Q	K	.	H	G	A	G	K	G	S	V	V	A	L	Y	T	K	R	S	L	E	L	V	I	G
Template Known Secondary structure		T	T	T	S																							T	T	S					S	S	S																						.	T	T			T	T									S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	I	L	R	A	G	M	I	V	V	N	V	N	P	L	Y	T	P	R	E	L	E	H	Q	L	N	D	S	G	A	S	A	I	V	I	V	S	N	F	A	H	T	L	E	K	V	V	D	K	T	A	V	Q	H	V	I	L	T	R	M	G	D	Q	L	S	T	A	K	G	T	V	V	N	F	V	V	K	Y
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	G	V	L	K	A	G	A	A	Y	L	P	V	D	P	K	L	P	E	D	R	I	S	Y	M	L	A	D	S	A	A	A	C	L	L	T	H	Q	E	M	K	E	Q	A	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T								T	T	S													T								S	T	T		T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	L	V	P	K	Y	H	L	P	D	A	I	S	F	R	S	A	L	H	N	G	Y	R	M	Q	Y	V	K	P	E	L	V	P	E	D	L	A	F	L	Q	Y	T	G	G	T	T	G	V	A	K	G	A	M	L	T	H	R	N	M	L	A	N	L	E	Q	V	N	A	T	Y	G	P	L	L	H	P	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.																																																																	.	.	.
Template Conservation		.	.	.	.	.	.																																																																	.	.	.
Template Sequence		.	.	.	.	.	.	L	P	Y	T	G	T	T	L	F	I	D	D	Q	T	R	F	E	E	Q	A	S	D	P	A	T	A	I	D	P	N	D	P	A	Y	I	M	Y	T	S	G	T	T	G	K	P	K	G	N	I	T	T	H	A	N	I	Q	G	L	V	K	H	V	D	Y	.	.	.	M	A	F	S	D	Q	D
Template Known Secondary structure		.	.	.	.	.	.					S					S	S		G	G	G	G	G	S		S	S								T	T	S										S	S	S	S																S	S			S	.	.	.	S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																																	.	.	.
Template SS confidence
								578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.				.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	V	T	A	L	P	L	Y	H	I	F	A	L	T	I	N	C	L	L	F	I	E	L	G	G	Q	N	L	L	I	T	N	P	R	D	I	P	G	L	V	K	E	L	A	K	Y	P	F	T	A	I	T	G	V	N	T	L	F	N	A	L	L	N	N	K	E	F	Q	Q	L	D	F	S	S	L	H	L	S
Query Conservation
Alig confidence																																																																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		T	F	L	S	V	S	N	Y	A	F	D	A	F	T	F	D	F	Y	A	S	M	L	N	A	A	R	L	I	I	A	D	E	H	T	L	L	D	T	E	R	L	T	D	L	I	L	Q	E	N	V	N	V	M	F	A	T	T	A	L	F	N	L	L	T	D	A	G	E	D	W	.	.	.	M	K	G	L	R	C	I
Template Known Secondary structure							S		T	T	S	T											T	T	T								G	G	G	T	T													T																			S			.	.	.			T		S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.				.	720	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																					.																											.	.	.
Query SS confidence																					.																											.	.	.
Query Sequence		A	G	G	G	M	P	V	Q	Q	V	V	A	E	R	W	V	K	L	T	.	G	Q	Y	L	L	E	G	Y	G	L	T	E	C	A	P	L	V	S	V	N	P	Y	D	I	D	Y	.	.	.	H	S	G	S	I	G	L	P	V	P	S	T	E	A	K	L	V	D	D	D	D	N	E	V	P	P	G	Q	P	G	E
Query Conservation																					.																											.	.	.
Alig confidence																					.																											.	.	.
Template Conservation
Template Sequence		L	F	G	G	E	R	A	S	V	P	H	V	R	K	A	L	R	I	M	G	P	G	K	L	I	N	C	Y	G	P	T	E	G	T	V	F	A	T	A	H	V	V	H	D	L	P	D	S	I	S	S	L	P	I	G	K	P	I	S	N	A	S	V	Y	I	L	N	E	Q	S	Q	L	Q	P	F	G	A	V	G	E
Template Known Secondary structure					S	S																T	T									G	G	G	S	S		S										S	S		S	S				B				T	T								T	T	S		B			T	T
Template Predicted Secondary structure
Template SS confidence
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.								.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		L	C	V	K	G	P	Q	V	M	L	G	Y	W	Q	R	P	D	A	T	D	E	I	I	K	N	.	.	.	.	.	.	.	G	W	L	H	T	G	D	I	A	V	M	D	E	E	G	F	L	R	I	V	D	R	K	K	D	M	I	L	V	S	G	F	N	V	Y	P	N	E	I	E	D	V	V	M	Q	H	P	G
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	C	I	S	G	M	G	V	S	K	G	Y	V	N	R	A	D	L	T	K	E	K	F	I	E	N	P	F	K	P	G	E	T	L	Y	R	T	G	D	L	A	R	W	L	P	D	G	T	I	E	Y	A	G	R	I	D	D	Q	V	K	I	R	G	H	R	I	E	L	E	E	I	E	K	Q	L	Q	E	Y	P	G
Template Known Secondary structure							T	T					B	T	T													T	T	S	T	T														T	T	S								G	G	G					T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	E	V	A	A	V	G	V	P	S	G	S	S	G	E	A	V	K	I	F	V	V	K	K	D	P	S	L	T	E	E	S	L	V	T	F	C	R	R	Q	L	T	G	Y	K	V	P	K	L	V	E	F	R	D	E	L	P	K	S	N	V	G	K	I	L	R	R	E	L	R	D	E	A	R	G	K	V	D	N
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		V	K	D	A	V	V	V	A	D	R	H	E	S	G	D	A	S	I	N	A	Y	L	V	N	R	.	T	Q	L	S	A	E	D	V	K	A	H	L	K	K	Q	L	P	A	Y	M	V	P	Q	T	F	T	F	L	D	E	L	P	L	T	T	N	G	K	V	N	K	R	L	L	P	K	P	D	Q	D	Q	L	A	E
Template Known Secondary structure													S	S	S											S	.	S	S	S													S		G	G	G	S		S						S						S	S		S	S			S							G	G	G	G
Template Predicted Secondary structure																											.
Template SS confidence
		886	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910		.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.
		560
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		965