Email l.a.kelley@imperial.ac.uk Description P75955 Date Thu Jan 5 12:16:24 GMT 2012 Unique Job ID 3e59882d6d1fd7e3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2l3oA_ 27.0 50 PDB header:cytokine Chain: A: PDB Molecule:interleukin 3; PDBTitle: solution structure of murine interleukin 3 2 c2wwbB_ 15.5 11 PDB header:ribosome Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome 3 d1rhzb_ 13.0 14 Fold:Single transmembrane helix Superfamily:Preprotein translocase SecE subunit Family:Preprotein translocase SecE subunit 4 c1h4uA_ 12.1 11 PDB header:extracellular matrix protein Chain: A: PDB Molecule:nidogen-1; PDBTitle: domain g2 of mouse nidogen-1 5 d1gl4a1 10.2 11 Fold:GFP-like Superfamily:GFP-like Family:Domain G2 of nidogen-1 6 c3bhpA_ 10.2 0 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: crystal structure of upf0291 protein ynzc from bacillus2 subtilis at resolution 2.0 a. northeast structural3 genomics consortium target sr384 7 c3kdvB_ 9.1 89 PDB header:dna binding protein Chain: B: PDB Molecule:dna damage response b protein; PDBTitle: crystal structure of dna damage response b (ddrb) from deinococcus2 geothermalis 8 d1xrda1 8.9 18 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 9 d1wu9a1 8.8 6 Fold:EB1 dimerisation domain-like Superfamily:EB1 dimerisation domain-like Family:EB1 dimerisation domain-like 10 c1ujlA_ 8.6 18 PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h PDBTitle: solution structure of the herg k+ channel s5-p2 extracellular linker 11 d1txqb1 8.4 6 Fold:EB1 dimerisation domain-like Superfamily:EB1 dimerisation domain-like Family:EB1 dimerisation domain-like 12 c1txqB_ 8.4 6 PDB header:structural protein/protein binding Chain: B: PDB Molecule:microtubule-associated protein rp/eb family PDBTitle: crystal structure of the eb1 c-terminal domain complexed2 with the cap-gly domain of p150glued 13 c2kncA_ 8.4 18 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 14 c2qnaB_ 8.0 15 PDB header:transport protein Chain: B: PDB Molecule:snurportin-1; PDBTitle: crystal structure of human importin-beta (127-876) in complex with the2 ibb-domain of snurportin1 (1-65) 15 c2latA_ 7.6 36 PDB header:membrane protein Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide--protein PDBTitle: solution structure of a human minimembrane protein ost4 16 c2ys9A_ 7.6 33 PDB header:transcription Chain: A: PDB Molecule:homeobox and leucine zipper protein homez; PDBTitle: structure of the third homeodomain from the human homeobox2 and leucine zipper protein, homez 17 c2eqoA_ 7.4 27 PDB header:transcription Chain: A: PDB Molecule:tnf receptor-associated factor 3-interacting PDBTitle: solution structure of the stn_traf3ip1_nd domain of2 interleukin 13 receptor alpha 1-binding protein-1 [homo3 sapiens] 18 c2gzdC_ 7.3 18 PDB header:protein transport Chain: C: PDB Molecule:rab11 family-interacting protein 2; PDBTitle: crystal structure of rab11 in complex with rab11-fip2 19 d2cpga_ 7.3 40 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:CopG-like 20 c2k1aA_ 6.9 21 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment 21 c3a98B_ not modelled 6.9 17 PDB header:signaling protein Chain: B: PDB Molecule:engulfment and cell motility protein 1; PDBTitle: crystal structure of the complex of the interacting regions of dock22 and elmo1 22 c3sojA_ not modelled 6.8 20 PDB header:cell adhesion Chain: A: PDB Molecule:pile; PDBTitle: francisella tularensis pilin pile 23 c2qx7A_ not modelled 6.5 21 PDB header:plant protein Chain: A: PDB Molecule:eugenol synthase 1; PDBTitle: structure of eugenol synthase from ocimum basilicum 24 c2jvdA_ not modelled 6.4 0 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: solution nmr structure of the folded n-terminal fragment of2 upf0291 protein ynzc from bacillus subtilis. northeast3 structural genomics target sr384-1-46 25 c2wssT_ not modelled 6.4 14 PDB header:hydrolase Chain: T: PDB Molecule:atp synthase subunit b, mitochondrial; PDBTitle: the structure of the membrane extrinsic region of bovine2 atp synthase 26 d1szia_ not modelled 6.2 19 Fold:Four-helical up-and-down bundle Superfamily:Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Family:Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain 27 c2adlB_ not modelled 6.1 60 PDB header:dna binding protein Chain: B: PDB Molecule:ccda; PDBTitle: solution structure of the bacterial antitoxin ccda:2 implications for dna and toxin binding 28 c1jb0M_ not modelled 6.1 29 PDB header:photosynthesis Chain: M: PDB Molecule:photosystem 1 reaction centre subunit xii; PDBTitle: crystal structure of photosystem i: a photosynthetic reaction center2 and core antenna system from cyanobacteria 29 d1jb0m_ not modelled 6.1 29 Fold:Single transmembrane helix Superfamily:Subunit XII of photosystem I reaction centre, PsaM Family:Subunit XII of photosystem I reaction centre, PsaM 30 d1fc2c_ not modelled 6.0 30 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 31 c2q5dD_ not modelled 5.9 10 PDB header:protein transport Chain: D: PDB Molecule:snurportin-1; PDBTitle: crystal structure of human importin beta bound to the2 snurportin1 ibb-domain second crystal form 32 d1iq8a4 not modelled 5.8 20 Fold:Cystatin-like Superfamily:Pre-PUA domain Family:Archaeosine tRNA-guanine transglycosylase, C2 domain 33 c2k6sB_ not modelled 5.6 20 PDB header:protein transport Chain: B: PDB Molecule:rab11fip2 protein; PDBTitle: structure of rab11-fip2 c-terminal coiled-coil domain 34 c3pvlB_ not modelled 5.6 45 PDB header:motor protein/protein transport Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of myosin viia myth4-ferm-sh3 in complex with the cen1 of2 sans 35 d1nkzb_ not modelled 5.6 13 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 36 c2hg5D_ not modelled 5.6 13 PDB header:membrane protein Chain: D: PDB Molecule:kcsa channel; PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter 37 c3mtuD_ not modelled 5.5 6 PDB header:contractile protein Chain: D: PDB Molecule:tropomyosin alpha-1 chain, microtubule-associated protein PDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle 38 d1lp1b_ not modelled 5.5 30 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 39 c2pbdV_ not modelled 5.5 71 PDB header:structural protein Chain: V: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: ternary complex of profilin-actin with the poly-pro-gab2 domain of vasp* 40 c2ww9B_ not modelled 5.4 18 PDB header:ribosome Chain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome 41 d1prtf_ not modelled 5.3 21 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 42 d2f2fa1 not modelled 5.3 33 Fold:beta-Trefoil Superfamily:Ricin B-like lectins Family:Ricin B-like