PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2eqoA_

Fold library id	PDB Header	Molecule	Title
c2eqoA_	PDB header: transcription	Chain: A: PDB Molecule: tnf receptor-associated factor 3-interacting	PDBTitle: solution structure of the stn_traf3ip1_nd domain of2 interleukin 13 receptor alpha 1-binding protein-1 [homo3 sapiens]

Links to external resources
Added to library: Tue Mar 16 12:30:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S S G S S G M N A A V V R R T Q E A L G K V I R R P P L T E K L L S K P P F R Y L H D I I T E V I R M T G F M K G L Y T D A E M K S D N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T T T T S
T
S S T T T S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K D K D A K I S F L Q K A I D V V V M V S G E P L L A K P A R I V A G H E P E R T N E L L Q I I G K C C L N K L S S D D A V R R V L A G E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
T T
S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	S	G	S	S	G	M	N	A	A	V	V	R	R	T	Q	E	A	L	G	K	V	I	R	R	P	P	L	T	E	K	L	L	S	K	P	P	F	R	Y	L	H	D	I	I	T	E	V	I	R	M	T	G	F	M	K	G	L	Y	T	D	A	E	M	K	S	D	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																	S				T	T	T	T	T	S																	T		S	S	T	T	T	S							G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	K	D	A	K	I	S	F	L	Q	K	A	I	D	V	V	V	M	V	S	G	E	P	L	L	A	K	P	A	R	I	V	A	G	H	E	P	E	R	T	N	E	L	L	Q	I	I	G	K	C	C	L	N	K	L	S	S	D	D	A	V	R	R	V	L	A	G	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																															T	T	T																			T	T				S									T