PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1szia_

Fold library id	Fold	Superfamily	Family
d1szia_	Four-helical up-and-down bundle	Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain	Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain

Links to external resources
Added to library: Tue Mar 16 12:59:01 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N R L P L T E A E L A L I A T P P E D S D M A S L Q Q Q R Q E Q N Y F V R L G S L S E R L R N H A Y E H S L G K L Q N A R Q K A Q E T L Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
T T
G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L T S V L G L M E S V K Q A K P E Q V E A R A L S M F R D I T Q Q L Q S M C V A L G A S I Q G L P S H V R E Q A Q Q A R S Q V N D L Q A T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T S
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . .

Sequence S G I H S F Q D L S A G V L A Q T R E R I A R A R E A L D N T V E Y V A Q N T P A M W L V G P F A P G I T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S G G G
T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	R	L	P	L	T	E	A	E	L	A	L	I	A	T	P	P	E	D	S	D	M	A	S	L	Q	Q	Q	R	Q	E	Q	N	Y	F	V	R	L	G	S	L	S	E	R	L	R	N	H	A	Y	E	H	S	L	G	K	L	Q	N	A	R	Q	K	A	Q	E	T	L	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S							T	T					T	T												T	T						G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	S	V	L	G	L	M	E	S	V	K	Q	A	K	P	E	Q	V	E	A	R	A	L	S	M	F	R	D	I	T	Q	Q	L	Q	S	M	C	V	A	L	G	A	S	I	Q	G	L	P	S	H	V	R	E	Q	A	Q	Q	A	R	S	Q	V	N	D	L	Q	A	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S																												T	T	T	T	S																						G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Sequence	S	G	I	H	S	F	Q	D	L	S	A	G	V	L	A	Q	T	R	E	R	I	A	R	A	R	E	A	L	D	N	T	V	E	Y	V	A	Q	N	T	P	A	M	W	L	V	G	P	F	A	P	G	I	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			S	G	G	G																													T				T	T