Job Description P42601 Confidence 2.80% Date Thu Jan 5 12:01:46 GMT 2012 Rank 37 Aligned Residues 196 % Identity 18% Template d1h2sa_ SCOP info Family A G protein-coupled receptor-like Family A G protein-coupled receptor-like Bacteriorhodopsin-like Resolution 1.93

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	P	L	L	W	G	G	F	A	V	V	V	A	I	M	L	A	I	D	L	L	L	Q	G	R	R	G	A	H	A	M	T	M	K	Q	A	A	A	W	S	L	V	W	V	T	L	S	L	L	F	N	A	A	F	W	W	Y	L	V	Q	T	E	G	R	A	V	A	D	P	Q	A	L	A	F	L	T	G	Y	L
Query Conservation
Alig confidence																				.	.	.																							.	.	.	.	.																														.	.
Template Conservation																				.	.	.																							.	.	.	.	.																														.	.
Template Sequence		L	T	T	L	F	W	L	G	A	I	G	M	L	V	G	T	L	A	.	.	.	F	A	W	A	G	R	D	A	G	S	G	E	R	R	Y	Y	V	T	L	V	G	I	.	.	.	.	.	S	G	I	A	A	V	A	Y	V	V	M	A	L	G	V	G	W	V	P	V	A	E	R	T	V	F	A	P	R	.	.	Y
Template Known Secondary structure																				.	.	.					T	T	T			T	T	T											.	.	.	.	.													T	T		S					T	T	S							.	.
Template Predicted Secondary structure																				.	.	.																							.	.	.	.	.																														.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		I	E	K	S	L	A	V	D	N	V	F	V	W	L	M	L	F	S	Y	F	S	V	P	A	A	L	Q	R	R	V	L	V	Y	G	V	L	G	A	I	V	L	R	T	I	M	I	F	T	G	S	W	L	I	S	Q	F	D	W	I	L	Y	I	F	G	A	.	.	.	.	F	L	L	F	T	G	V	K	M	A	L
Query Conservation																																																																			.	.	.	.
Alig confidence																				.	.				.	.	.	.	.																																						.	.	.	.
Template Conservation																				.	.				.	.	.	.	.
Template Sequence		I	D	W	I	L	T	T	P	L	I	V	Y	F	L	G	L	L	A	.	.	G	L	D	.	.	.	.	.	S	R	E	F	G	I	V	I	T	L	N	T	V	V	M	L	A	G	F	A	G	A	M	V	P	G	I	E	R	Y	A	L	F	G	M	G	A	V	A	F	L	G	L	V	Y	Y	L	V	G	P	M	T
Template Known Secondary structure																				.	.	T			.	.	.	.	.																										S	T																						T
Template Predicted Secondary structure																				.	.				.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	E	D	E	S	G	I	G	D	K	P	L	V	R	W	L	R	G	H	L	R	M	T	D	T	I	D	N	E	H	F	F	V	R	K	N	G	L	L	Y	A	T	P	L	M	L	V	L	I	L	V	E	L	S	D	V	I
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		E	S	A	S	Q	R	S	S	G	I	K	S	L	Y	V	R	L	R	N	L	T	V	I	L	W	A	I	Y	P	F	I	W	L	L	G	P	P	G	V	A	L	L	T	P	T	V	D	V	A	L	.	I	V	Y	L	D	L	V
Template Known Secondary structure					T	T	S																				T	T								S	T	T	T	T			S									.
Template Predicted Secondary structure																																																				.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions